Balci H - Search Results

1

G-Quadruplex-Enabling Sequence within the Human Tyrosine Hydroxylase Promoter Differentially Regulates Transcription.

Farhath MM, Thompson M, Ray S, Sewell A, Balci H, Basu S. Farhath MM, et al. Among authors: balci h. Biochemistry. 2015 Sep 15;54(36):5533-45. doi: 10.1021/acs.biochem.5b00209. Epub 2015 Aug 28. Biochemistry. 2015. PMID: 26284527

2

Replication protein A unfolds G-quadruplex structures with varying degrees of efficiency.

Qureshi MH, Ray S, Sewell AL, Basu S, Balci H. Qureshi MH, et al. Among authors: balci h. J Phys Chem B. 2012 May 17;116(19):5588-94. doi: 10.1021/jp300546u. Epub 2012 May 3. J Phys Chem B. 2012. PMID: 22500657 Free PMC article.

3

RPA-mediated unfolding of systematically varying G-quadruplex structures.

Ray S, Qureshi MH, Malcolm DW, Budhathoki JB, Celik U, Balci H. Ray S, et al. Among authors: balci h. Biophys J. 2013 May 21;104(10):2235-45. doi: 10.1016/j.bpj.2013.04.004. Biophys J. 2013. PMID: 23708363 Free PMC article.

4

G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding.

Ray S, Bandaria JN, Qureshi MH, Yildiz A, Balci H. Ray S, et al. Among authors: balci h. Proc Natl Acad Sci U S A. 2014 Feb 25;111(8):2990-5. doi: 10.1073/pnas.1321436111. Epub 2014 Feb 10. Proc Natl Acad Sci U S A. 2014. PMID: 24516170 Free PMC article.

5

RecQ-core of BLM unfolds telomeric G-quadruplex in the absence of ATP.

Budhathoki JB, Ray S, Urban V, Janscak P, Yodh JG, Balci H. Budhathoki JB, et al. Among authors: balci h. Nucleic Acids Res. 2014 Oct;42(18):11528-45. doi: 10.1093/nar/gku856. Epub 2014 Sep 22. Nucleic Acids Res. 2014. PMID: 25245947 Free PMC article.

6

A practical guide to studying G-quadruplex structures using single-molecule FRET.

Maleki P, Budhathoki JB, Roy WA, Balci H. Maleki P, et al. Among authors: balci h. Mol Genet Genomics. 2017 Jun;292(3):483-498. doi: 10.1007/s00438-017-1288-2. Epub 2017 Feb 1. Mol Genet Genomics. 2017. PMID: 28150040 Free PMC article. Review.

7

A force sensor that converts fluorescence signal into force measurement utilizing short looped DNA.

Mustafa G, Chuang CY, Roy WA, Farhath MM, Pokhrel N, Ma Y, Nagasawa K, Antony E, Comstock MJ, Basu S, Balci H. Mustafa G, et al. Among authors: balci h. Biosens Bioelectron. 2018 Dec 15;121:34-40. doi: 10.1016/j.bios.2018.08.073. Epub 2018 Aug 31. Biosens Bioelectron. 2018. PMID: 30195120 Free PMC article.

8

Impact of Small Molecules on Intermolecular G-Quadruplex Formation.

Gyawali P, Gc K, Ma Y, Abeysirigunawardena S, Nagasawa K, Balci H. Gyawali P, et al. Among authors: balci h. Molecules. 2019 Apr 20;24(8):1570. doi: 10.3390/molecules24081570. Molecules. 2019. PMID: 31010019 Free PMC article.

9

Interrogating accessibility of telomeric sequences with FRET-PAINT: evidence for length-dependent telomere compaction.

Mustafa G, Shiekh S, Gc K, Abeysirigunawardena S, Balci H. Mustafa G, et al. Among authors: balci h. Nucleic Acids Res. 2021 Apr 6;49(6):3371-3380. doi: 10.1093/nar/gkab067. Nucleic Acids Res. 2021. PMID: 33693934 Free PMC article.

10

Mono- and bilayer smectic liquid crystal ordering in dense solutions of "gapped" DNA duplexes.

Gyawali P, Saha R, Smith GP, Salamonczyk M, Kharel P, Basu S, Li R, Fukuto M, Gleeson JT, Clark NA, Jákli A, Balci H, Sprunt S. Gyawali P, et al. Among authors: balci h. Proc Natl Acad Sci U S A. 2021 Mar 23;118(12):e2019996118. doi: 10.1073/pnas.2019996118. Proc Natl Acad Sci U S A. 2021. PMID: 33731478 Free PMC article.

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