Shanks OC - Search Results

1

Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups.

Fisher JC, Eren AM, Green HC, Shanks OC, Morrison HG, Vineis JH, Sogin ML, McLellan SL. Fisher JC, et al. Among authors: shanks oc. Appl Environ Microbiol. 2015 Oct;81(20):7023-33. doi: 10.1128/AEM.01524-15. Epub 2015 Jul 31. Appl Environ Microbiol. 2015. PMID: 26231648 Free PMC article.

2

Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples.

Shanks OC, Santo Domingo JW, Lamendella R, Kelty CA, Graham JE. Shanks OC, et al. Appl Environ Microbiol. 2006 Jun;72(6):4054-60. doi: 10.1128/AEM.00023-06. Appl Environ Microbiol. 2006. PMID: 16751515 Free PMC article.

3

Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon.

Shanks OC, Nietch C, Simonich M, Younger M, Reynolds D, Field KG. Shanks OC, et al. Appl Environ Microbiol. 2006 Aug;72(8):5537-46. doi: 10.1128/AEM.03059-05. Appl Environ Microbiol. 2006. PMID: 16885307 Free PMC article.

4

Identification of bacterial DNA markers for the detection of human fecal pollution in water.

Shanks OC, Domingo JW, Lu J, Kelty CA, Graham JE. Shanks OC, et al. Appl Environ Microbiol. 2007 Apr;73(8):2416-22. doi: 10.1128/AEM.02474-06. Epub 2007 Jan 5. Appl Environ Microbiol. 2007. PMID: 17209067 Free PMC article.

5

Identification of chicken-specific fecal microbial sequences using a metagenomic approach.

Lu J, Santo Domingo J, Shanks OC. Lu J, et al. Among authors: shanks oc. Water Res. 2007 Aug;41(16):3561-74. doi: 10.1016/j.watres.2007.05.033. Epub 2007 May 24. Water Res. 2007. PMID: 17582456

6

Quantitative PCR for detection and enumeration of genetic markers of bovine fecal pollution.

Shanks OC, Atikovic E, Blackwood AD, Lu J, Noble RT, Domingo JS, Seifring S, Sivaganesan M, Haugland RA. Shanks OC, et al. Appl Environ Microbiol. 2008 Feb;74(3):745-52. doi: 10.1128/AEM.01843-07. Epub 2007 Dec 7. Appl Environ Microbiol. 2008. PMID: 18065617 Free PMC article.

7

Temporal assessment of the impact of exposure to cow feces in two watersheds by multiple host-specific PCR assays.

Lee YJ, Molina M, Santo Domingo JW, Willis JD, Cyterski M, Endale DM, Shanks OC. Lee YJ, et al. Among authors: shanks oc. Appl Environ Microbiol. 2008 Nov;74(22):6839-47. doi: 10.1128/AEM.00601-08. Epub 2008 Sep 19. Appl Environ Microbiol. 2008. PMID: 18806002 Free PMC article.

8

Quantitative PCR for genetic markers of human fecal pollution.

Shanks OC, Kelty CA, Sivaganesan M, Varma M, Haugland RA. Shanks OC, et al. Appl Environ Microbiol. 2009 Sep;75(17):5507-13. doi: 10.1128/AEM.00305-09. Epub 2009 Jul 10. Appl Environ Microbiol. 2009. PMID: 19592537 Free PMC article.

9

Performance assessment PCR-based assays targeting bacteroidales genetic markers of bovine fecal pollution.

Shanks OC, White K, Kelty CA, Hayes S, Sivaganesan M, Jenkins M, Varma M, Haugland RA. Shanks OC, et al. Appl Environ Microbiol. 2010 Mar;76(5):1359-66. doi: 10.1128/AEM.02033-09. Epub 2010 Jan 8. Appl Environ Microbiol. 2010. PMID: 20061457 Free PMC article.

10

Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by qPCR.

Haugland RA, Varma M, Sivaganesan M, Kelty C, Peed L, Shanks OC. Haugland RA, et al. Among authors: shanks oc. Syst Appl Microbiol. 2010 Oct;33(6):348-57. doi: 10.1016/j.syapm.2010.06.001. Epub 2010 Jul 24. Syst Appl Microbiol. 2010. PMID: 20655680

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