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Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development.
Schmouth JF, Arenillas D, Corso-Díaz X, Xie YY, Bohacec S, Banks KG, Bonaguro RJ, Wong SH, Jones SJ, Marra MA, Simpson EM, Wasserman WW. Schmouth JF, et al. Among authors: wasserman ww. BMC Genomics. 2015 Jul 24;16(1):545. doi: 10.1186/s12864-015-1770-3. BMC Genomics. 2015. PMID: 26204903 Free PMC article.
Complete functional rescue of the ABCA1-/- mouse by human BAC transgenesis.
Coutinho JM, Singaraja RR, Kang M, Arenillas DJ, Bertram LN, Bissada N, Staels B, Fruchart JC, Fievet C, Joseph-George AM, Wasserman WW, Hayden MR. Coutinho JM, et al. Among authors: wasserman ww. J Lipid Res. 2005 Jun;46(6):1113-23. doi: 10.1194/jlr.M400506-JLR200. Epub 2005 Mar 16. J Lipid Res. 2005. PMID: 15772424 Free article.
SAGE2Splice: unmapped SAGE tags reveal novel splice junctions.
Kuo BY, Chen Y, Bohacec S, Johansson O, Wasserman WW, Simpson EM. Kuo BY, et al. Among authors: wasserman ww. PLoS Comput Biol. 2006 Apr;2(4):e34. doi: 10.1371/journal.pcbi.0020034. Epub 2006 Apr 28. PLoS Comput Biol. 2006. PMID: 16683015 Free PMC article.
ORegAnno: an open-access community-driven resource for regulatory annotation.
Griffith OL, Montgomery SB, Bernier B, Chu B, Kasaian K, Aerts S, Mahony S, Sleumer MC, Bilenky M, Haeussler M, Griffith M, Gallo SM, Giardine B, Hooghe B, Van Loo P, Blanco E, Ticoll A, Lithwick S, Portales-Casamar E, Donaldson IJ, Robertson G, Wadelius C, De Bleser P, Vlieghe D, Halfon MS, Wasserman W, Hardison R, Bergman CM, Jones SJ; Open Regulatory Annotation Consortium. Griffith OL, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D107-13. doi: 10.1093/nar/gkm967. Epub 2007 Nov 15. Nucleic Acids Res. 2008. PMID: 18006570 Free PMC article.
In silico detection of sequence variations modifying transcriptional regulation.
Andersen MC, Engström PG, Lithwick S, Arenillas D, Eriksson P, Lenhard B, Wasserman WW, Odeberg J. Andersen MC, et al. Among authors: wasserman ww. PLoS Comput Biol. 2008 Jan;4(1):e5. doi: 10.1371/journal.pcbi.0040005. Epub 2007 Nov 27. PLoS Comput Biol. 2008. PMID: 18208319 Free PMC article.
221 results