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Page 1
Decoupling of the PI3K Pathway via Mutation Necessitates Combinatorial Treatment in HER2+ Breast Cancer.
Korkola JE, Collisson EA, Heiser M, Oates C, Bayani N, Itani S, Esch A, Thompson W, Griffith OL, Wang NJ, Kuo WL, Cooper B, Billig J, Ziyad S, Hung JL, Jakkula L, Feiler H, Lu Y, Mills GB, Spellman PT, Tomlin C, Mukherjee S, Gray JW. Korkola JE, et al. Among authors: oates c. PLoS One. 2015 Jul 16;10(7):e0133219. doi: 10.1371/journal.pone.0133219. eCollection 2015. PLoS One. 2015. PMID: 26181325 Free PMC article.
Correction: Decoupling of the PI3K Pathway via Mutation Necessitates Combinatorial Treatment in HER2+ Breast Cancer.
Korkola JE, Collisson EA, Heiser LM, Oates C, Bayani N, Itani S, Esch A, Thompson W, Griffith OL, Wang NJ, Kuo WL, Cooper B, Billig J, Ziyad S, Hung JL, Jakkula L, Feiler H, Lu Y, Mills GB, Spellman PT, Tomlin C, Mukherjee S, Gray JW. Korkola JE, et al. Among authors: oates c. PLoS One. 2017 Oct 11;12(10):e0186551. doi: 10.1371/journal.pone.0186551. eCollection 2017. PLoS One. 2017. PMID: 29020035 Free PMC article.
Causal network inference using biochemical kinetics.
Oates CJ, Dondelinger F, Bayani N, Korkola J, Gray JW, Mukherjee S. Oates CJ, et al. Bioinformatics. 2014 Sep 1;30(17):i468-74. doi: 10.1093/bioinformatics/btu452. Bioinformatics. 2014. PMID: 25161235 Free PMC article.
Network Inference and Biological Dynamics.
Oates CJ, Mukherjee S. Oates CJ, et al. Ann Appl Stat. 2012 Sep;6(3):1209-1235. doi: 10.1214/11-AOAS532. Ann Appl Stat. 2012. PMID: 23284600 Free PMC article.
Network inference using steady-state data and Goldbeter-Koshland kinetics. [corrected].
Oates CJ, Hennessy BT, Lu Y, Mills GB, Mukherjee S. Oates CJ, et al. Bioinformatics. 2012 Sep 15;28(18):2342-8. doi: 10.1093/bioinformatics/bts459. Epub 2012 Jul 19. Bioinformatics. 2012. PMID: 22815361 Free PMC article.
AVAILABILITY: mukherjeelab.nki.nl/CODE/GK_Kinetics.zip CONTACT: c.j.oates@warwick.ac.uk; s.mukherjee@nki.nl SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online....
AVAILABILITY: mukherjeelab.nki.nl/CODE/GK_Kinetics.zip CONTACT: c.j.oates@warwick.ac.uk; s.mukherjee@nki.nl SUPPLEMENTARY INFO …
Single-cell states in the estrogen response of breast cancer cell lines.
Casale FP, Giurato G, Nassa G, Armond JW, Oates CJ, Corá D, Gamba A, Mukherjee S, Weisz A, Nicodemi M. Casale FP, et al. PLoS One. 2014 Feb 25;9(2):e88485. doi: 10.1371/journal.pone.0088485. eCollection 2014. PLoS One. 2014. PMID: 24586334 Free PMC article.
Causal Learning via Manifold Regularization.
Hill SM, Oates CJ, Blythe DA, Mukherjee S. Hill SM, et al. J Mach Learn Res. 2019;20:127. J Mach Learn Res. 2019. PMID: 31992961 Free PMC article.
163 results