Raj A - Search Results

1

Multiplexed detection of viral infections using rapid in situ RNA analysis on a chip.

Shaffer SM, Joshi RP, Chambers BS, Sterken D, Biaesch AG, Gabrieli DJ, Li Y, Feemster KA, Hensley SE, Issadore D, Raj A. Shaffer SM, et al. Among authors: raj a. Lab Chip. 2015 Aug 7;15(15):3170-82. doi: 10.1039/c5lc00459d. Lab Chip. 2015. PMID: 26113495 Free PMC article.

2

Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes.

Raj A, Tyagi S. Raj A, et al. Methods Enzymol. 2010;472:365-86. doi: 10.1016/S0076-6879(10)72004-8. Methods Enzymol. 2010. PMID: 20580972

3

Turbo FISH: a method for rapid single molecule RNA FISH.

Shaffer SM, Wu MT, Levesque MJ, Raj A. Shaffer SM, et al. Among authors: raj a. PLoS One. 2013 Sep 16;8(9):e75120. doi: 10.1371/journal.pone.0075120. eCollection 2013. PLoS One. 2013. PMID: 24066168 Free PMC article.

4

RNA sequencing in situ.

Ginart P, Raj A. Ginart P, et al. Among authors: raj a. Nat Biotechnol. 2014 Jun;32(6):543-4. doi: 10.1038/nbt.2921. Nat Biotechnol. 2014. PMID: 24911498 No abstract available.

5

Visualization of lncRNA by single-molecule fluorescence in situ hybridization.

Dunagin M, Cabili MN, Rinn J, Raj A. Dunagin M, et al. Among authors: raj a. Methods Mol Biol. 2015;1262:3-19. doi: 10.1007/978-1-4939-2253-6_1. Methods Mol Biol. 2015. PMID: 25555572

6

Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution.

Cabili MN, Dunagin MC, McClanahan PD, Biaesch A, Padovan-Merhar O, Regev A, Rinn JL, Raj A. Cabili MN, et al. Among authors: raj a. Genome Biol. 2015 Jan 29;16(1):20. doi: 10.1186/s13059-015-0586-4. Genome Biol. 2015. PMID: 25630241 Free PMC article.

7

Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms.

Padovan-Merhar O, Nair GP, Biaesch AG, Mayer A, Scarfone S, Foley SW, Wu AR, Churchman LS, Singh A, Raj A. Padovan-Merhar O, et al. Among authors: raj a. Mol Cell. 2015 Apr 16;58(2):339-52. doi: 10.1016/j.molcel.2015.03.005. Epub 2015 Apr 9. Mol Cell. 2015. PMID: 25866248 Free PMC article.

8

Transcriptional Bursting Explains the Noise-Versus-Mean Relationship in mRNA and Protein Levels.

Dar RD, Shaffer SM, Singh A, Razooky BS, Simpson ML, Raj A, Weinberger LS. Dar RD, et al. Among authors: raj a. PLoS One. 2016 Jul 28;11(7):e0158298. doi: 10.1371/journal.pone.0158298. eCollection 2016. PLoS One. 2016. PMID: 27467384 Free PMC article.

9

Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance.

Shaffer SM, Dunagin MC, Torborg SR, Torre EA, Emert B, Krepler C, Beqiri M, Sproesser K, Brafford PA, Xiao M, Eggan E, Anastopoulos IN, Vargas-Garcia CA, Singh A, Nathanson KL, Herlyn M, Raj A. Shaffer SM, et al. Among authors: raj a. Nature. 2017 Jun 15;546(7658):431-435. doi: 10.1038/nature22794. Epub 2017 Jun 7. Nature. 2017. PMID: 28607484 Free PMC article.

10

A magnetic micropore chip for rapid (<1 hour) unbiased circulating tumor cell isolation and in situ RNA analysis.

Ko J, Bhagwat N, Yee SS, Black T, Redlinger C, Romeo J, O'Hara M, Raj A, Carpenter EL, Stanger BZ, Issadore D. Ko J, et al. Among authors: raj a. Lab Chip. 2017 Sep 12;17(18):3086-3096. doi: 10.1039/c7lc00703e. Lab Chip. 2017. PMID: 28809985 Free PMC article.

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