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Accurate and fast multiple-testing correction in eQTL studies.
Sul JH, Raj T, de Jong S, de Bakker PI, Raychaudhuri S, Ophoff RA, Stranger BE, Eskin E, Han B. Sul JH, et al. Among authors: de bakker pi, de jong s. Am J Hum Genet. 2015 Jun 4;96(6):857-68. doi: 10.1016/j.ajhg.2015.04.012. Epub 2015 May 28. Am J Hum Genet. 2015. PMID: 26027500 Free PMC article.
A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC.
de Bakker PI, McVean G, Sabeti PC, Miretti MM, Green T, Marchini J, Ke X, Monsuur AJ, Whittaker P, Delgado M, Morrison J, Richardson A, Walsh EC, Gao X, Galver L, Hart J, Hafler DA, Pericak-Vance M, Todd JA, Daly MJ, Trowsdale J, Wijmenga C, Vyse TJ, Beck S, Murray SS, Carrington M, Gregory S, Deloukas P, Rioux JD. de Bakker PI, et al. Nat Genet. 2006 Oct;38(10):1166-72. doi: 10.1038/ng1885. Epub 2006 Sep 24. Nat Genet. 2006. PMID: 16998491 Free PMC article.
Transferability of tag SNPs in genetic association studies in multiple populations.
de Bakker PI, Burtt NP, Graham RR, Guiducci C, Yelensky R, Drake JA, Bersaglieri T, Penney KL, Butler J, Young S, Onofrio RC, Lyon HN, Stram DO, Haiman CA, Freedman ML, Zhu X, Cooper R, Groop L, Kolonel LN, Henderson BE, Daly MJ, Hirschhorn JN, Altshuler D. de Bakker PI, et al. Nat Genet. 2006 Nov;38(11):1298-303. doi: 10.1038/ng1899. Epub 2006 Oct 22. Nat Genet. 2006. PMID: 17057720
Comprehensive association testing of common genetic variation in DNA repair pathway genes in relationship with breast cancer risk in multiple populations.
Haiman CA, Hsu C, de Bakker PI, Frasco M, Sheng X, Van Den Berg D, Casagrande JT, Kolonel LN, Le Marchand L, Hankinson SE, Han J, Dunning AM, Pooley KA, Freedman ML, Hunter DJ, Wu AH, Stram DO, Henderson BE. Haiman CA, et al. Among authors: de bakker pi. Hum Mol Genet. 2008 Mar 15;17(6):825-34. doi: 10.1093/hmg/ddm354. Epub 2007 Dec 3. Hum Mol Genet. 2008. PMID: 18056155
Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis.
Raychaudhuri S, Sandor C, Stahl EA, Freudenberg J, Lee HS, Jia X, Alfredsson L, Padyukov L, Klareskog L, Worthington J, Siminovitch KA, Bae SC, Plenge RM, Gregersen PK, de Bakker PI. Raychaudhuri S, et al. Among authors: de bakker pi. Nat Genet. 2012 Jan 29;44(3):291-6. doi: 10.1038/ng.1076. Nat Genet. 2012. PMID: 22286218 Free PMC article.
Bayesian inference analyses of the polygenic architecture of rheumatoid arthritis.
Stahl EA, Wegmann D, Trynka G, Gutierrez-Achury J, Do R, Voight BF, Kraft P, Chen R, Kallberg HJ, Kurreeman FA; Diabetes Genetics Replication and Meta-analysis Consortium; Myocardial Infarction Genetics Consortium; Kathiresan S, Wijmenga C, Gregersen PK, Alfredsson L, Siminovitch KA, Worthington J, de Bakker PI, Raychaudhuri S, Plenge RM. Stahl EA, et al. Among authors: de bakker pi. Nat Genet. 2012 Mar 25;44(5):483-9. doi: 10.1038/ng.2232. Nat Genet. 2012. PMID: 22446960 Free PMC article.
284 results