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CopywriteR: DNA copy number detection from off-target sequence data.
Kuilman T, Velds A, Kemper K, Ranzani M, Bombardelli L, Hoogstraat M, Nevedomskaya E, Xu G, de Ruiter J, Lolkema MP, Ylstra B, Jonkers J, Rottenberg S, Wessels LF, Adams DJ, Peeper DS, Krijgsman O. Kuilman T, et al. Among authors: ylstra b. Genome Biol. 2015 Feb 27;16(1):49. doi: 10.1186/s13059-015-0617-1. Genome Biol. 2015. PMID: 25887352 Free PMC article.
Human and mouse oligonucleotide-based array CGH.
van den Ijssel P, Tijssen M, Chin SF, Eijk P, Carvalho B, Hopmans E, Holstege H, Bangarusamy DK, Jonkers J, Meijer GA, Caldas C, Ylstra B. van den Ijssel P, et al. Among authors: ylstra b. Nucleic Acids Res. 2005 Dec 16;33(22):e192. doi: 10.1093/nar/gni191. Nucleic Acids Res. 2005. PMID: 16361265 Free PMC article.
DNA copy number alterations in endobronchial squamous metaplastic lesions predict lung cancer.
van Boerdonk RA, Sutedja TG, Snijders PJ, Reinen E, Wilting SM, van de Wiel MA, Thunnissen FE, Duin S, Kooi C, Ylstra B, Meijer CJ, Meijer GA, Grünberg K, Daniels JM, Postmus PE, Smit EF, Heideman DA. van Boerdonk RA, et al. Among authors: ylstra b. Am J Respir Crit Care Med. 2011 Oct 15;184(8):948-56. doi: 10.1164/rccm.201102-0218OC. Epub 2011 Jul 28. Am J Respir Crit Care Med. 2011. PMID: 21799074
Detection limits of DNA copy number alterations in heterogeneous cell populations.
Krijgsman O, Israeli D, van Essen HF, Eijk PP, Berens ML, Mellink CH, Nieuwint AW, Weiss MM, Steenbergen RD, Meijer GA, Ylstra B. Krijgsman O, et al. Among authors: ylstra b. Cell Oncol (Dordr). 2013 Feb;36(1):27-36. doi: 10.1007/s13402-012-0108-2. Epub 2012 Nov 2. Cell Oncol (Dordr). 2013. PMID: 23117839
251 results