Fondufe-Mittendorf YN - Search Results

1

Inorganic Arsenic-induced cellular transformation is coupled with genome wide changes in chromatin structure, transcriptome and splicing patterns.

Riedmann C, Ma Y, Melikishvili M, Godfrey SG, Zhang Z, Chen KC, Rouchka EC, Fondufe-Mittendorf YN. Riedmann C, et al. BMC Genomics. 2015 Mar 19;16(1):212. doi: 10.1186/s12864-015-1295-9. BMC Genomics. 2015. PMID: 25879800 Free PMC article.

2

Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs.

Nalabothula N, Xi L, Bhattacharyya S, Widom J, Wang JP, Reeve JN, Santangelo TJ, Fondufe-Mittendorf YN. Nalabothula N, et al. BMC Genomics. 2013 Jun 10;14:391. doi: 10.1186/1471-2164-14-391. BMC Genomics. 2013. PMID: 23758892 Free PMC article.

3

The chromatin architectural proteins HMGD1 and H1 bind reciprocally and have opposite effects on chromatin structure and gene regulation.

Nalabothula N, McVicker G, Maiorano J, Martin R, Pritchard JK, Fondufe-Mittendorf YN. Nalabothula N, et al. BMC Genomics. 2014 Feb 1;15:92. doi: 10.1186/1471-2164-15-92. BMC Genomics. 2014. PMID: 24484546 Free PMC article.

4

Genome-Wide Profiling of PARP1 Reveals an Interplay with Gene Regulatory Regions and DNA Methylation.

Nalabothula N, Al-jumaily T, Eteleeb AM, Flight RM, Xiaorong S, Moseley H, Rouchka EC, Fondufe-Mittendorf YN. Nalabothula N, et al. PLoS One. 2015 Aug 25;10(8):e0135410. doi: 10.1371/journal.pone.0135410. eCollection 2015. PLoS One. 2015. PMID: 26305327 Free PMC article.

5

Quantitative Mass Spectrometry Reveals Changes in Histone H2B Variants as Cells Undergo Inorganic Arsenic-Mediated Cellular Transformation.

Rea M, Jiang T, Eleazer R, Eckstein M, Marshall AG, Fondufe-Mittendorf YN. Rea M, et al. Mol Cell Proteomics. 2016 Jul;15(7):2411-22. doi: 10.1074/mcp.M116.058412. Epub 2016 May 11. Mol Cell Proteomics. 2016. PMID: 27169413 Free PMC article.

6

Involvement of PARP1 in the regulation of alternative splicing.

Matveeva E, Maiorano J, Zhang Q, Eteleeb AM, Convertini P, Chen J, Infantino V, Stamm S, Wang J, Rouchka EC, Fondufe-Mittendorf YN. Matveeva E, et al. Cell Discov. 2016 Feb 16;2:15046. doi: 10.1038/celldisc.2015.46. eCollection 2016. Cell Discov. 2016. PMID: 27462443 Free PMC article.

7

Comparative analysis of linker histone H1, MeCP2, and HMGD1 on nucleosome stability and target site accessibility.

Riedmann C, Fondufe-Mittendorf YN. Riedmann C, et al. Sci Rep. 2016 Sep 14;6:33186. doi: 10.1038/srep33186. Sci Rep. 2016. PMID: 27624769 Free PMC article.

8

Genome-wide DNA methylation reprogramming in response to inorganic arsenic links inhibition of CTCF binding, DNMT expression and cellular transformation.

Rea M, Eckstein M, Eleazer R, Smith C, Fondufe-Mittendorf YN. Rea M, et al. Sci Rep. 2017 Feb 2;7:41474. doi: 10.1038/srep41474. Sci Rep. 2017. PMID: 28150704 Free PMC article.

9

Transient and permanent changes in DNA methylation patterns in inorganic arsenic-mediated epithelial-to-mesenchymal transition.

Eckstein M, Rea M, Fondufe-Mittendorf YN. Eckstein M, et al. Toxicol Appl Pharmacol. 2017 Sep 15;331:6-17. doi: 10.1016/j.taap.2017.03.017. Epub 2017 Mar 21. Toxicol Appl Pharmacol. 2017. PMID: 28336213 Free PMC article.

10

Methodology to Identify Poly-ADP-Ribose Polymerase 1 (PARP1)-mRNA Targets by PAR-CLiP.

Melikishvili M, Matveeva E, Fondufe-Mittendorf Y. Melikishvili M, et al. Methods Mol Biol. 2017;1608:211-228. doi: 10.1007/978-1-4939-6993-7_15. Methods Mol Biol. 2017. PMID: 28695513

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