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Personalized genomic analyses for cancer mutation discovery and interpretation.
Jones S, Anagnostou V, Lytle K, Parpart-Li S, Nesselbush M, Riley DR, Shukla M, Chesnick B, Kadan M, Papp E, Galens KG, Murphy D, Zhang T, Kann L, Sausen M, Angiuoli SV, Diaz LA Jr, Velculescu VE. Jones S, et al. Among authors: zhang t. Sci Transl Med. 2015 Apr 15;7(283):283ra53. doi: 10.1126/scitranslmed.aaa7161. Sci Transl Med. 2015. PMID: 25877891 Free PMC article.
Evolution of Neoantigen Landscape during Immune Checkpoint Blockade in Non-Small Cell Lung Cancer.
Anagnostou V, Smith KN, Forde PM, Niknafs N, Bhattacharya R, White J, Zhang T, Adleff V, Phallen J, Wali N, Hruban C, Guthrie VB, Rodgers K, Naidoo J, Kang H, Sharfman W, Georgiades C, Verde F, Illei P, Li QK, Gabrielson E, Brock MV, Zahnow CA, Baylin SB, Scharpf RB, Brahmer JR, Karchin R, Pardoll DM, Velculescu VE. Anagnostou V, et al. Among authors: zhang t. Cancer Discov. 2017 Mar;7(3):264-276. doi: 10.1158/2159-8290.CD-16-0828. Epub 2016 Dec 28. Cancer Discov. 2017. PMID: 28031159 Free PMC article.
T cell immune evasion by SARS-CoV-2 JN.1 escapees targeting two cytotoxic T cell epitope hotspots.
Tian J, Shang B, Zhang J, Guo Y, Li M, Hu Y, Bai D, She J, Han Y, Guo P, Huang M, Wang Y, Liu M, Zhang J, Ye B, Guo Y, Yang M, Lin Y, Zhang T, Sun X, Yuan X, Zhang D, Xu Z, Chai Y, Qi J, Liu K, Tan S, Zhao Y, Zhou J, Song R, Gao GF, Liu J. Tian J, et al. Among authors: zhang t. Nat Immunol. 2025 Jan 28. doi: 10.1038/s41590-024-02051-0. Online ahead of print. Nat Immunol. 2025. PMID: 39875585
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