Shinkai A - Search Results

1

Structural biology. Structures of the CRISPR-Cmr complex reveal mode of RNA target positioning.

Taylor DW, Zhu Y, Staals RH, Kornfeld JE, Shinkai A, van der Oost J, Nogales E, Doudna JA. Taylor DW, et al. Among authors: shinkai a. Science. 2015 May 1;348(6234):581-5. doi: 10.1126/science.aaa4535. Epub 2015 Apr 2. Science. 2015. PMID: 25837515 Free PMC article.

2

Structure and activity of the RNA-targeting Type III-B CRISPR-Cas complex of Thermus thermophilus.

Staals RHJ, Agari Y, Maki-Yonekura S, Zhu Y, Taylor DW, van Duijn E, Barendregt A, Vlot M, Koehorst JJ, Sakamoto K, Masuda A, Dohmae N, Schaap PJ, Doudna JA, Heck AJR, Yonekura K, van der Oost J, Shinkai A. Staals RHJ, et al. Among authors: shinkai a. Mol Cell. 2013 Oct 10;52(1):135-145. doi: 10.1016/j.molcel.2013.09.013. Mol Cell. 2013. PMID: 24119403 Free PMC article.

3

RNA targeting by the type III-A CRISPR-Cas Csm complex of Thermus thermophilus.

Staals RH, Zhu Y, Taylor DW, Kornfeld JE, Sharma K, Barendregt A, Koehorst JJ, Vlot M, Neupane N, Varossieau K, Sakamoto K, Suzuki T, Dohmae N, Yokoyama S, Schaap PJ, Urlaub H, Heck AJ, Nogales E, Doudna JA, Shinkai A, van der Oost J. Staals RH, et al. Among authors: shinkai a. Mol Cell. 2014 Nov 20;56(4):518-30. doi: 10.1016/j.molcel.2014.10.005. Epub 2014 Nov 6. Mol Cell. 2014. PMID: 25457165 Free PMC article.

4

SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation.

Steens JA, Zhu Y, Taylor DW, Bravo JPK, Prinsen SHP, Schoen CD, Keijser BJF, Ossendrijver M, Hofstra LM, Brouns SJJ, Shinkai A, van der Oost J, Staals RHJ. Steens JA, et al. Among authors: shinkai a. Nat Commun. 2021 Aug 19;12(1):5033. doi: 10.1038/s41467-021-25337-5. Nat Commun. 2021. PMID: 34413302 Free PMC article.

5

[Structure and function of Type III-B CRISPR-Cmr complex from Thermus thermophilus].

Shinkai A. Shinkai A. Seikagaku. 2015 Aug;87(4):454-8. Seikagaku. 2015. PMID: 26571617 Review. Japanese. No abstract available.

6

Transcription profile of Thermus thermophilus CRISPR systems after phage infection.

Agari Y, Sakamoto K, Tamakoshi M, Oshima T, Kuramitsu S, Shinkai A. Agari Y, et al. Among authors: shinkai a. J Mol Biol. 2010 Jan 15;395(2):270-81. doi: 10.1016/j.jmb.2009.10.057. Epub 2009 Nov 3. J Mol Biol. 2010. PMID: 19891975

7

X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermophilus HB8.

Agari Y, Yokoyama S, Kuramitsu S, Shinkai A. Agari Y, et al. Among authors: shinkai a. Proteins. 2008 Dec;73(4):1063-7. doi: 10.1002/prot.22224. Proteins. 2008. PMID: 18798563 No abstract available.

8

Crystal structure of hypothetical protein TTHB210, controlled by the σ(E) /anti-σ(E) regulatory system in Thermus thermophilus HB8, reveals a novel homodecamer.

Agari Y, Kuramitsu S, Shinkai A. Agari Y, et al. Among authors: shinkai a. Proteins. 2012 Mar;80(3):958-62. doi: 10.1002/prot.23250. Epub 2012 Jan 9. Proteins. 2012. PMID: 22231934 No abstract available.

9

X-ray crystal structure of a CRISPR-associated RAMP module [corrected] Cmr5 protein [corrected] from Thermus thermophilus HB8.

Sakamoto K, Agari Y, Agari K, Yokoyama S, Kuramitsu S, Shinkai A. Sakamoto K, et al. Among authors: shinkai a. Proteins. 2009 May 1;75(2):528-32. doi: 10.1002/prot.22358. Proteins. 2009. PMID: 19173314 No abstract available.

10

Structure of D-alanine-D-alanine ligase from Thermus thermophilus HB8: cumulative conformational change and enzyme-ligand interactions.

Kitamura Y, Ebihara A, Agari Y, Shinkai A, Hirotsu K, Kuramitsu S. Kitamura Y, et al. Among authors: shinkai a. Acta Crystallogr D Biol Crystallogr. 2009 Oct;65(Pt 10):1098-106. doi: 10.1107/S0907444909029710. Epub 2009 Sep 16. Acta Crystallogr D Biol Crystallogr. 2009. PMID: 19770507 Free PMC article.

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