Cortini R - Search Results

1

Theory and simulations of toroidal and rod-like structures in single-molecule DNA condensation.

Cortini R, Caré BR, Victor JM, Barbi M. Cortini R, et al. J Chem Phys. 2015 Mar 14;142(10):105102. doi: 10.1063/1.4914513. J Chem Phys. 2015. PMID: 25770562

2

The tilt-dependent potential of mean force of a pair of DNA oligomers from all-atom molecular dynamics simulations.

Cortini R, Cheng X, Smith JC. Cortini R, et al. J Phys Condens Matter. 2017 Mar 1;29(8):084002. doi: 10.1088/1361-648X/aa4e68. Epub 2017 Jan 16. J Phys Condens Matter. 2017. PMID: 28092632

3

Chiral electrostatics breaks the mirror symmetry of DNA supercoiling.

Cortini R, Lee DJ, Kornyshev A. Cortini R, et al. J Phys Condens Matter. 2012 Apr 25;24(16):162203. doi: 10.1088/0953-8984/24/16/162203. J Phys Condens Matter. 2012. PMID: 22467204

4

Electrostatic braiding and homologous pairing of DNA double helices.

Cortini R, Kornyshev AA, Lee DJ, Leikin S. Cortini R, et al. Biophys J. 2011 Aug 17;101(4):875-84. doi: 10.1016/j.bpj.2011.06.058. Biophys J. 2011. PMID: 21843478 Free PMC article.

5

Theoretical principles of transcription factor traffic on folded chromatin.

Cortini R, Filion GJ. Cortini R, et al. Nat Commun. 2018 Apr 30;9(1):1740. doi: 10.1038/s41467-018-04130-x. Nat Commun. 2018. PMID: 29712907 Free PMC article.

6

Calibrating Seed-Based Heuristics to Map Short Reads With Sesame.

Filion GJ, Cortini R, Zorita E. Filion GJ, et al. Among authors: cortini r. Front Genet. 2020 Jun 25;11:572. doi: 10.3389/fgene.2020.00572. eCollection 2020. Front Genet. 2020. PMID: 32670351 Free PMC article.

7

Clustering of Drosophila housekeeping promoters facilitates their expression.

Corrales M, Rosado A, Cortini R, van Arensbergen J, van Steensel B, Filion GJ. Corrales M, et al. Among authors: cortini r. Genome Res. 2017 Jul;27(7):1153-1161. doi: 10.1101/gr.211433.116. Epub 2017 Apr 18. Genome Res. 2017. PMID: 28420691 Free PMC article.

8

ATAC-seq reveals regional differences in enhancer accessibility during the establishment of spatial coordinates in the Drosophila blastoderm.

Bozek M, Cortini R, Storti AE, Unnerstall U, Gaul U, Gompel N. Bozek M, et al. Among authors: cortini r. Genome Res. 2019 May;29(5):771-783. doi: 10.1101/gr.242362.118. Epub 2019 Apr 8. Genome Res. 2019. PMID: 30962180 Free PMC article.

9

Large-scale automated identification of mouse brain cells in confocal light sheet microscopy images.

Frasconi P, Silvestri L, Soda P, Cortini R, Pavone FS, Iannello G. Frasconi P, et al. Among authors: cortini r. Bioinformatics. 2014 Sep 1;30(17):i587-93. doi: 10.1093/bioinformatics/btu469. Bioinformatics. 2014. PMID: 25161251 Free PMC article.

10

Complete sequence analyses show that two defective interfering influenza viral RNAs contain a single internal deletion of a polymerase gene.

Nayak DP, Sivasubramanian N, Davis AR, Cortini R, Sung J. Nayak DP, et al. Among authors: cortini r. Proc Natl Acad Sci U S A. 1982 Apr;79(7):2216-20. doi: 10.1073/pnas.79.7.2216. Proc Natl Acad Sci U S A. 1982. PMID: 6954536 Free PMC article.

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