Baker D - Search Results

1

Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement.

DiMaio F, Song Y, Li X, Brunner MJ, Xu C, Conticello V, Egelman E, Marlovits T, Cheng Y, Baker D. DiMaio F, et al. Among authors: baker d. Nat Methods. 2015 Apr;12(4):361-365. doi: 10.1038/nmeth.3286. Epub 2015 Feb 23. Nat Methods. 2015. PMID: 25707030 Free PMC article.

2

A protein-folding reaction under kinetic control.

Baker D, Sohl JL, Agard DA. Baker D, et al. Nature. 1992 Mar 19;356(6366):263-5. doi: 10.1038/356263a0. Nature. 1992. PMID: 1552947

3

A surprising simplicity to protein folding.

Baker D. Baker D. Nature. 2000 May 4;405(6782):39-42. doi: 10.1038/35011000. Nature. 2000. PMID: 10811210

4

Design of a novel globular protein fold with atomic-level accuracy.

Kuhlman B, Dantas G, Ireton GC, Varani G, Stoddard BL, Baker D. Kuhlman B, et al. Among authors: baker d. Science. 2003 Nov 21;302(5649):1364-8. doi: 10.1126/science.1089427. Science. 2003. PMID: 14631033

5

Progress and challenges in high-resolution refinement of protein structure models.

Misura KM, Baker D. Misura KM, et al. Among authors: baker d. Proteins. 2005 Apr 1;59(1):15-29. doi: 10.1002/prot.20376. Proteins. 2005. PMID: 15690346

6

Physically realistic homology models built with ROSETTA can be more accurate than their templates.

Misura KM, Chivian D, Rohl CA, Kim DE, Baker D. Misura KM, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5361-6. doi: 10.1073/pnas.0509355103. Epub 2006 Mar 27. Proc Natl Acad Sci U S A. 2006. PMID: 16567638 Free PMC article.

7

Computational redesign of endonuclease DNA binding and cleavage specificity.

Ashworth J, Havranek JJ, Duarte CM, Sussman D, Monnat RJ Jr, Stoddard BL, Baker D. Ashworth J, et al. Among authors: baker d. Nature. 2006 Jun 1;441(7093):656-9. doi: 10.1038/nature04818. Nature. 2006. PMID: 16738662 Free PMC article.

8

RosettaDock in CAPRI rounds 6-12.

Wang C, Schueler-Furman O, Andre I, London N, Fleishman SJ, Bradley P, Qian B, Baker D. Wang C, et al. Among authors: baker d. Proteins. 2007 Dec 1;69(4):758-63. doi: 10.1002/prot.21684. Proteins. 2007. PMID: 17671979

9

Automated de novo prediction of native-like RNA tertiary structures.

Das R, Baker D. Das R, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2007 Sep 11;104(37):14664-9. doi: 10.1073/pnas.0703836104. Epub 2007 Aug 28. Proc Natl Acad Sci U S A. 2007. PMID: 17726102 Free PMC article.

10

Protein-protein docking with backbone flexibility.

Wang C, Bradley P, Baker D. Wang C, et al. Among authors: baker d. J Mol Biol. 2007 Oct 19;373(2):503-19. doi: 10.1016/j.jmb.2007.07.050. Epub 2007 Aug 2. J Mol Biol. 2007. PMID: 17825317

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