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Page 1
Aquaria: simplifying discovery and insight from protein structures.
O'Donoghue SI, Sabir KS, Kalemanov M, Stolte C, Wellmann B, Ho V, Roos M, Perdigão N, Buske FA, Heinrich J, Rost B, Schafferhans A. O'Donoghue SI, et al. Among authors: perdigao n. Nat Methods. 2015 Feb;12(2):98-9. doi: 10.1038/nmeth.3258. Nat Methods. 2015. PMID: 25633501 No abstract available.
How to learn about gene function: text-mining or ontologies?
Soldatos TG, Perdigão N, Brown NP, Sabir KS, O'Donoghue SI. Soldatos TG, et al. Among authors: perdigao n. Methods. 2015 Mar;74:3-15. doi: 10.1016/j.ymeth.2014.07.004. Epub 2014 Aug 1. Methods. 2015. PMID: 25088781 Review.
Unexpected features of the dark proteome.
Perdigão N, Heinrich J, Stolte C, Sabir KS, Buckley MJ, Tabor B, Signal B, Gloss BS, Hammang CJ, Rost B, Schafferhans A, O'Donoghue SI. Perdigão N, et al. Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):15898-903. doi: 10.1073/pnas.1508380112. Epub 2015 Nov 17. Proc Natl Acad Sci U S A. 2015. PMID: 26578815 Free PMC article.
The Dark Proteome Database.
Perdigão N, Rosa AC, O'Donoghue SI. Perdigão N, et al. BioData Min. 2017 Jul 20;10:24. doi: 10.1186/s13040-017-0144-6. eCollection 2017. BioData Min. 2017. PMID: 28736578 Free PMC article.
Dark Proteome Database: Studies on Disorder.
Perdigão N, Pina PMC, Rocha C, Tavares JMRS, Rosa A. Perdigão N, et al. High Throughput. 2020 Jun 30;9(3):15. doi: 10.3390/ht9030015. High Throughput. 2020. PMID: 32629790 Free PMC article.