Berthold MR - Search Results

1

Workflows for automated downstream data analysis and visualization in large-scale computational mass spectrometry.

Aiche S, Sachsenberg T, Kenar E, Walzer M, Wiswedel B, Kristl T, Boyles M, Duschl A, Huber CG, Berthold MR, Reinert K, Kohlbacher O. Aiche S, et al. Among authors: berthold mr. Proteomics. 2015 Apr;15(8):1443-7. doi: 10.1002/pmic.201400391. Epub 2015 Feb 14. Proteomics. 2015. PMID: 25604327 Free PMC article.

2

KNIME-CDK: Workflow-driven cheminformatics.

Beisken S, Meinl T, Wiswedel B, de Figueiredo LF, Berthold M, Steinbeck C. Beisken S, et al. BMC Bioinformatics. 2013 Aug 22;14:257. doi: 10.1186/1471-2105-14-257. BMC Bioinformatics. 2013. PMID: 24103053 Free PMC article.

3

Looking over the rim: algorithms for cheminformatics from computer scientists.

Meinl T, Wiswedel B, Berthold MR. Meinl T, et al. Among authors: berthold mr. J Cheminform. 2014 Mar 11;6(Suppl 1):O13. doi: 10.1186/1758-2946-6-S1-O13. eCollection 2014 Mar. J Cheminform. 2014. PMID: 24765111 Free PMC article. No abstract available.

4

Whither systems medicine?

Apweiler R, Beissbarth T, Berthold MR, Blüthgen N, Burmeister Y, Dammann O, Deutsch A, Feuerhake F, Franke A, Hasenauer J, Hoffmann S, Höfer T, Jansen PL, Kaderali L, Klingmüller U, Koch I, Kohlbacher O, Kuepfer L, Lammert F, Maier D, Pfeifer N, Radde N, Rehm M, Roeder I, Saez-Rodriguez J, Sax U, Schmeck B, Schuppert A, Seilheimer B, Theis FJ, Vera J, Wolkenhauer O. Apweiler R, et al. Among authors: berthold mr. Exp Mol Med. 2018 Mar 2;50(3):e453. doi: 10.1038/emm.2017.290. Exp Mol Med. 2018. PMID: 29497170 Free PMC article. Review.

5

KNIME for reproducible cross-domain analysis of life science data.

Fillbrunn A, Dietz C, Pfeuffer J, Rahn R, Landrum GA, Berthold MR. Fillbrunn A, et al. Among authors: berthold mr. J Biotechnol. 2017 Nov 10;261:149-156. doi: 10.1016/j.jbiotec.2017.07.028. Epub 2017 Jul 27. J Biotechnol. 2017. PMID: 28757290 Free article. Review.

6

Automated workflows for modelling chemical fate, kinetics and toxicity.

Sala Benito JV, Paini A, Richarz AN, Meinl T, Berthold MR, Cronin MTD, Worth AP. Sala Benito JV, et al. Among authors: berthold mr. Toxicol In Vitro. 2017 Dec;45(Pt 2):249-257. doi: 10.1016/j.tiv.2017.03.004. Epub 2017 Mar 18. Toxicol In Vitro. 2017. PMID: 28323105 Free PMC article.

7

MARK-AGE data management: Cleaning, exploration and visualization of data.

Baur J, Moreno-Villanueva M, Kötter T, Sindlinger T, Bürkle A, Berthold MR, Junk M. Baur J, et al. Among authors: berthold mr. Mech Ageing Dev. 2015 Nov;151:38-44. doi: 10.1016/j.mad.2015.05.007. Epub 2015 May 21. Mech Ageing Dev. 2015. PMID: 26004801 Free article.

8

KNIME for Open-Source Bioimage Analysis: A Tutorial.

Dietz C, Berthold MR. Dietz C, et al. Among authors: berthold mr. Adv Anat Embryol Cell Biol. 2016;219:179-97. doi: 10.1007/978-3-319-28549-8_7. Adv Anat Embryol Cell Biol. 2016. PMID: 27207367

9

Connecting proteins with drug-like compounds: Open source drug discovery workflows with BindingDB and KNIME.

Nicola G, Berthold MR, Hedrick MP, Gilson MK. Nicola G, et al. Among authors: berthold mr. Database (Oxford). 2015 Sep 16;2015:bav087. doi: 10.1093/database/bav087. Print 2015. Database (Oxford). 2015. PMID: 26384374 Free PMC article.

10

A KNIME-Based Analysis of the Zebrafish Photomotor Response Clusters the Phenotypes of 14 Classes of Neuroactive Molecules.

Copmans D, Meinl T, Dietz C, van Leeuwen M, Ortmann J, Berthold MR, de Witte PA. Copmans D, et al. Among authors: berthold mr. J Biomol Screen. 2016 Jun;21(5):427-36. doi: 10.1177/1087057115618348. Epub 2015 Dec 4. J Biomol Screen. 2016. PMID: 26637551

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