Shin J - Search Results

1

AraNet v2: an improved database of co-functional gene networks for the study of Arabidopsis thaliana and 27 other nonmodel plant species.

Lee T, Yang S, Kim E, Ko Y, Hwang S, Shin J, Shim JE, Shim H, Kim H, Kim C, Lee I. Lee T, et al. Among authors: shin j. Nucleic Acids Res. 2015 Jan;43(Database issue):D996-1002. doi: 10.1093/nar/gku1053. Epub 2014 Oct 29. Nucleic Acids Res. 2015. PMID: 25355510 Free PMC article.

2

YeastNet v3: a public database of data-specific and integrated functional gene networks for Saccharomyces cerevisiae.

Kim H, Shin J, Kim E, Kim H, Hwang S, Shim JE, Lee I. Kim H, et al. Among authors: shin j. Nucleic Acids Res. 2014 Jan;42(Database issue):D731-6. doi: 10.1093/nar/gkt981. Epub 2013 Oct 27. Nucleic Acids Res. 2014. PMID: 24165882 Free PMC article.

3

WormNet v3: a network-assisted hypothesis-generating server for Caenorhabditis elegans.

Cho A, Shin J, Hwang S, Kim C, Shim H, Kim H, Kim H, Lee I. Cho A, et al. Among authors: shin j. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W76-82. doi: 10.1093/nar/gku367. Epub 2014 May 9. Nucleic Acids Res. 2014. PMID: 24813450 Free PMC article.

4

EcoliNet: a database of cofunctional gene network for Escherichia coli.

Kim H, Shim JE, Shin J, Lee I. Kim H, et al. Among authors: shin j. Database (Oxford). 2015 Feb 2;2015:bav001. doi: 10.1093/database/bav001. Print 2015. Database (Oxford). 2015. PMID: 25650278 Free PMC article.

5

RiceNet v2: an improved network prioritization server for rice genes.

Lee T, Oh T, Yang S, Shin J, Hwang S, Kim CY, Kim H, Shim H, Shim JE, Ronald PC, Lee I. Lee T, et al. Among authors: shin j. Nucleic Acids Res. 2015 Jul 1;43(W1):W122-7. doi: 10.1093/nar/gkv253. Epub 2015 Mar 26. Nucleic Acids Res. 2015. PMID: 25813048 Free PMC article.

6

FlyNet: a versatile network prioritization server for the Drosophila community.

Shin J, Yang S, Kim E, Kim CY, Shim H, Cho A, Kim H, Hwang S, Shim JE, Lee I. Shin J, et al. Nucleic Acids Res. 2015 Jul 1;43(W1):W91-7. doi: 10.1093/nar/gkv453. Epub 2015 May 5. Nucleic Acids Res. 2015. PMID: 25943544 Free PMC article.

7

Construction of Functional Gene Networks Using Phylogenetic Profiles.

Shin J, Lee I. Shin J, et al. Methods Mol Biol. 2017;1526:87-98. doi: 10.1007/978-1-4939-6613-4_5. Methods Mol Biol. 2017. PMID: 27896737

8

Predicting genetic modifier loci using functional gene networks.

Lee I, Lehner B, Vavouri T, Shin J, Fraser AG, Marcotte EM. Lee I, et al. Among authors: shin j. Genome Res. 2010 Aug;20(8):1143-53. doi: 10.1101/gr.102749.109. Epub 2010 Jun 9. Genome Res. 2010. PMID: 20538624 Free PMC article.

9

Complementarity between distance- and probability-based methods of gene neighbourhood identification for pathway reconstruction.

Shin J, Lee T, Kim H, Lee I. Shin J, et al. Mol Biosyst. 2014 Jan;10(1):24-9. doi: 10.1039/c3mb70366e. Mol Biosyst. 2014. PMID: 24194096

10

Network-assisted genetic dissection of pathogenicity and drug resistance in the opportunistic human pathogenic fungus Cryptococcus neoformans.

Kim H, Jung KW, Maeng S, Chen YL, Shin J, Shim JE, Hwang S, Janbon G, Kim T, Heitman J, Bahn YS, Lee I. Kim H, et al. Among authors: shin j. Sci Rep. 2015 Mar 5;5:8767. doi: 10.1038/srep08767. Sci Rep. 2015. PMID: 25739925 Free PMC article.

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