Hoopmann MR - Search Results

1

Crux: rapid open source protein tandem mass spectrometry analysis.

McIlwain S, Tamura K, Kertesz-Farkas A, Grant CE, Diament B, Frewen B, Howbert JJ, Hoopmann MR, Käll L, Eng JK, MacCoss MJ, Noble WS. McIlwain S, et al. Among authors: hoopmann mr. J Proteome Res. 2014 Oct 3;13(10):4488-91. doi: 10.1021/pr500741y. Epub 2014 Sep 9. J Proteome Res. 2014. PMID: 25182276 Free PMC article.

2

High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometry.

Hoopmann MR, Finney GL, MacCoss MJ. Hoopmann MR, et al. Anal Chem. 2007 Aug 1;79(15):5620-32. doi: 10.1021/ac0700833. Epub 2007 Jun 21. Anal Chem. 2007. PMID: 17580982 Free PMC article.

3

Label-free comparative analysis of proteomics mixtures using chromatographic alignment of high-resolution muLC-MS data.

Finney GL, Blackler AR, Hoopmann MR, Canterbury JD, Wu CC, MacCoss MJ. Finney GL, et al. Among authors: hoopmann mr. Anal Chem. 2008 Feb 15;80(4):961-71. doi: 10.1021/ac701649e. Epub 2008 Jan 12. Anal Chem. 2008. PMID: 18189369

4

Assessing the dynamic range and peak capacity of nanoflow LC-FAIMS-MS on an ion trap mass spectrometer for proteomics.

Canterbury JD, Yi X, Hoopmann MR, MacCoss MJ. Canterbury JD, et al. Among authors: hoopmann mr. Anal Chem. 2008 Sep 15;80(18):6888-97. doi: 10.1021/ac8004988. Epub 2008 Aug 12. Anal Chem. 2008. PMID: 18693747 Free PMC article.

5

Post analysis data acquisition for the iterative MS/MS sampling of proteomics mixtures.

Hoopmann MR, Merrihew GE, von Haller PD, MacCoss MJ. Hoopmann MR, et al. J Proteome Res. 2009 Apr;8(4):1870-5. doi: 10.1021/pr800828p. J Proteome Res. 2009. PMID: 19256536 Free PMC article.

6

Comparison of database search strategies for high precursor mass accuracy MS/MS data.

Hsieh EJ, Hoopmann MR, MacLean B, MacCoss MJ. Hsieh EJ, et al. Among authors: hoopmann mr. J Proteome Res. 2010 Feb 5;9(2):1138-43. doi: 10.1021/pr900816a. J Proteome Res. 2010. PMID: 19938873 Free PMC article.

7

Deconvolution of mixture spectra from ion-trap data-independent-acquisition tandem mass spectrometry.

Bern M, Finney G, Hoopmann MR, Merrihew G, Toth MJ, MacCoss MJ. Bern M, et al. Among authors: hoopmann mr. Anal Chem. 2010 Feb 1;82(3):833-41. doi: 10.1021/ac901801b. Anal Chem. 2010. PMID: 20039681 Free PMC article.

8

Isotope signatures allow identification of chemically cross-linked peptides by mass spectrometry: a novel method to determine interresidue distances in protein structures through cross-linking.

Zelter A, Hoopmann MR, Vernon R, Baker D, MacCoss MJ, Davis TN. Zelter A, et al. Among authors: hoopmann mr. J Proteome Res. 2010 Jul 2;9(7):3583-9. doi: 10.1021/pr1001115. J Proteome Res. 2010. PMID: 20476776 Free PMC article.

9

Improved strategies for rapid identification of chemically cross-linked peptides using protein interaction reporter technology.

Hoopmann MR, Weisbrod CR, Bruce JE. Hoopmann MR, et al. J Proteome Res. 2010 Dec 3;9(12):6323-33. doi: 10.1021/pr100572u. Epub 2010 Nov 10. J Proteome Res. 2010. PMID: 20886857 Free PMC article.

10

Identification of ejaculated proteins in the house mouse (Mus domesticus) via isotopic labeling.

Dean MD, Findlay GD, Hoopmann MR, Wu CC, MacCoss MJ, Swanson WJ, Nachman MW. Dean MD, et al. Among authors: hoopmann mr. BMC Genomics. 2011 Jun 10;12:306. doi: 10.1186/1471-2164-12-306. BMC Genomics. 2011. PMID: 21663664 Free PMC article.

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