Eichner J - Search Results

1

RPPApipe: a pipeline for the analysis of reverse-phase protein array data.

Eichner J, Heubach Y, Ruff M, Kohlhof H, Strobl S, Mayer B, Pawlak M, Templin MF, Zell A. Eichner J, et al. Biosystems. 2014 Aug;122:19-24. doi: 10.1016/j.biosystems.2014.06.009. Epub 2014 Jun 18. Biosystems. 2014. PMID: 24951946

2

Qualitative translation of relations from BioPAX to SBML qual.

Büchel F, Wrzodek C, Mittag F, Dräger A, Eichner J, Rodriguez N, Le Novère N, Zell A. Büchel F, et al. Among authors: eichner j. Bioinformatics. 2012 Oct 15;28(20):2648-53. doi: 10.1093/bioinformatics/bts508. Epub 2012 Aug 24. Bioinformatics. 2012. PMID: 22923304 Free PMC article.

3

Pathway-based visualization of cross-platform microarray datasets.

Wrzodek C, Eichner J, Zell A. Wrzodek C, et al. Among authors: eichner j. Bioinformatics. 2012 Dec 1;28(23):3021-6. doi: 10.1093/bioinformatics/bts583. Epub 2012 Oct 9. Bioinformatics. 2012. PMID: 23047564

4

InCroMAP: integrated analysis of cross-platform microarray and pathway data.

Wrzodek C, Eichner J, Büchel F, Zell A. Wrzodek C, et al. Among authors: eichner j. Bioinformatics. 2013 Feb 15;29(4):506-8. doi: 10.1093/bioinformatics/bts709. Epub 2012 Dec 20. Bioinformatics. 2013. PMID: 23257199 Free PMC article.

5

TFpredict and SABINE: sequence-based prediction of structural and functional characteristics of transcription factors.

Eichner J, Topf F, Dräger A, Wrzodek C, Wanke D, Zell A. Eichner J, et al. PLoS One. 2013 Dec 12;8(12):e82238. doi: 10.1371/journal.pone.0082238. eCollection 2013. PLoS One. 2013. PMID: 24349230 Free PMC article.

6

Integrated enrichment analysis and pathway-centered visualization of metabolomics, proteomics, transcriptomics, and genomics data by using the InCroMAP software.

Eichner J, Rosenbaum L, Wrzodek C, Häring HU, Zell A, Lehmann R. Eichner J, et al. J Chromatogr B Analyt Technol Biomed Life Sci. 2014 Sep 1;966:77-82. doi: 10.1016/j.jchromb.2014.04.030. Epub 2014 Apr 25. J Chromatogr B Analyt Technol Biomed Life Sci. 2014. PMID: 24811976

7

Cross-platform toxicogenomics for the prediction of non-genotoxic hepatocarcinogenesis in rat.

Römer M, Eichner J, Metzger U, Templin MF, Plummer S, Ellinger-Ziegelbauer H, Zell A. Römer M, et al. Among authors: eichner j. PLoS One. 2014 May 15;9(5):e97640. doi: 10.1371/journal.pone.0097640. eCollection 2014. PLoS One. 2014. PMID: 24830643 Free PMC article.

8

ToxDBScan: Large-scale similarity screening of toxicological databases for drug candidates.

Römer M, Backert L, Eichner J, Zell A. Römer M, et al. Among authors: eichner j. Int J Mol Sci. 2014 Oct 21;15(10):19037-55. doi: 10.3390/ijms151019037. Int J Mol Sci. 2014. PMID: 25338045 Free PMC article.

9

Linking the epigenome to the genome: correlation of different features to DNA methylation of CpG islands.

Wrzodek C, Büchel F, Hinselmann G, Eichner J, Mittag F, Zell A. Wrzodek C, et al. Among authors: eichner j. PLoS One. 2012;7(4):e35327. doi: 10.1371/journal.pone.0035327. Epub 2012 Apr 30. PLoS One. 2012. PMID: 22558141 Free PMC article.

10

SBMLsqueezer 2: context-sensitive creation of kinetic equations in biochemical networks.

Dräger A, Zielinski DC, Keller R, Rall M, Eichner J, Palsson BO, Zell A. Dräger A, et al. Among authors: eichner j. BMC Syst Biol. 2015 Oct 9;9:68. doi: 10.1186/s12918-015-0212-9. BMC Syst Biol. 2015. PMID: 26452770 Free PMC article.

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