Milne I - Search Results

1

The low-recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression.

Baker K, Bayer M, Cook N, Dreißig S, Dhillon T, Russell J, Hedley PE, Morris J, Ramsay L, Colas I, Waugh R, Steffenson B, Milne I, Stephen G, Marshall D, Flavell AJ. Baker K, et al. Among authors: milne i. Plant J. 2014 Sep;79(6):981-92. doi: 10.1111/tpj.12600. Epub 2014 Aug 5. Plant J. 2014. PMID: 24947331 Free PMC article.

2

Chromatin state analysis of the barley epigenome reveals a higher-order structure defined by H3K27me1 and H3K27me3 abundance.

Baker K, Dhillon T, Colas I, Cook N, Milne I, Milne L, Bayer M, Flavell AJ. Baker K, et al. Among authors: milne i, milne l. Plant J. 2015 Oct;84(1):111-24. doi: 10.1111/tpj.12963. Epub 2015 Sep 9. Plant J. 2015. PMID: 26255869 Free PMC article.

3

Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data.

Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR. Moragues M, et al. Among authors: milne i. Theor Appl Genet. 2010 May;120(8):1525-34. doi: 10.1007/s00122-010-1273-1. Epub 2010 Feb 16. Theor Appl Genet. 2010. PMID: 20157694

4

Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings.

Milne I, Bayer M, Stephen G, Cardle L, Marshall D. Milne I, et al. Methods Mol Biol. 2016;1374:253-68. doi: 10.1007/978-1-4939-3167-5_14. Methods Mol Biol. 2016. PMID: 26519411

5

An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome.

Ribeiro A, Golicz A, Hackett CA, Milne I, Stephen G, Marshall D, Flavell AJ, Bayer M. Ribeiro A, et al. Among authors: milne i. BMC Bioinformatics. 2015 Nov 11;16:382. doi: 10.1186/s12859-015-0801-z. BMC Bioinformatics. 2015. PMID: 26558718 Free PMC article.

6

Tablet--next generation sequence assembly visualization.

Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall D. Milne I, et al. Bioinformatics. 2010 Feb 1;26(3):401-2. doi: 10.1093/bioinformatics/btp666. Epub 2009 Dec 4. Bioinformatics. 2010. PMID: 19965881 Free PMC article.

7

An eQTL analysis of partial resistance to Puccinia hordei in barley.

Chen X, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I, Morris J, Ramsay L, Marshall D, Cardle L, Waugh R. Chen X, et al. Among authors: milne i. PLoS One. 2010 Jan 6;5(1):e8598. doi: 10.1371/journal.pone.0008598. PLoS One. 2010. PMID: 20066049 Free PMC article.

8

Flapjack--graphical genotype visualization.

Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WT, Flavell AJ, Marshall D. Milne I, et al. Bioinformatics. 2010 Dec 15;26(24):3133-4. doi: 10.1093/bioinformatics/btq580. Epub 2010 Oct 18. Bioinformatics. 2010. PMID: 20956241 Free PMC article.

9

Using Tablet for visual exploration of second-generation sequencing data.

Milne I, Stephen G, Bayer M, Cock PJ, Pritchard L, Cardle L, Shaw PD, Marshall D. Milne I, et al. Brief Bioinform. 2013 Mar;14(2):193-202. doi: 10.1093/bib/bbs012. Epub 2012 Mar 24. Brief Bioinform. 2013. PMID: 22445902

10

Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation.

Russell J, Mascher M, Dawson IK, Kyriakidis S, Calixto C, Freund F, Bayer M, Milne I, Marshall-Griffiths T, Heinen S, Hofstad A, Sharma R, Himmelbach A, Knauft M, van Zonneveld M, Brown JW, Schmid K, Kilian B, Muehlbauer GJ, Stein N, Waugh R. Russell J, et al. Among authors: milne i. Nat Genet. 2016 Sep;48(9):1024-30. doi: 10.1038/ng.3612. Epub 2016 Jul 18. Nat Genet. 2016. PMID: 27428750

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