Flavell AJ - Search Results

1

The low-recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression.

Baker K, Bayer M, Cook N, Dreißig S, Dhillon T, Russell J, Hedley PE, Morris J, Ramsay L, Colas I, Waugh R, Steffenson B, Milne I, Stephen G, Marshall D, Flavell AJ. Baker K, et al. Among authors: flavell aj. Plant J. 2014 Sep;79(6):981-92. doi: 10.1111/tpj.12600. Epub 2014 Aug 5. Plant J. 2014. PMID: 24947331 Free PMC article.

2

Analysis of >1000 single nucleotide polymorphisms in geographically matched samples of landrace and wild barley indicates secondary contact and chromosome-level differences in diversity around domestication genes.

Russell J, Dawson IK, Flavell AJ, Steffenson B, Weltzien E, Booth A, Ceccarelli S, Grando S, Waugh R. Russell J, et al. Among authors: flavell aj. New Phytol. 2011 Jul;191(2):564-578. doi: 10.1111/j.1469-8137.2011.03704.x. Epub 2011 Mar 28. New Phytol. 2011. PMID: 21443695 Free article.

3

Chromatin state analysis of the barley epigenome reveals a higher-order structure defined by H3K27me1 and H3K27me3 abundance.

Baker K, Dhillon T, Colas I, Cook N, Milne I, Milne L, Bayer M, Flavell AJ. Baker K, et al. Among authors: flavell aj. Plant J. 2015 Oct;84(1):111-24. doi: 10.1111/tpj.12963. Epub 2015 Sep 9. Plant J. 2015. PMID: 26255869 Free PMC article.

4

Whole-genome association mapping in elite inbred crop varieties.

Waugh R, Marshall D, Thomas B, Comadran J, Russell J, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J, O'Sullivan D, Mackay I, Flavell A; AGOUEB; BarleyCAP; Ramsay L. Waugh R, et al. Genome. 2010 Nov;53(11):967-72. doi: 10.1139/G10-078. Genome. 2010. PMID: 21076512

5

Natural variation in meiotic recombination rate shapes introgression patterns in intraspecific hybrids between wild and domesticated barley.

Dreissig S, Maurer A, Sharma R, Milne L, Flavell AJ, Schmutzer T, Pillen K. Dreissig S, et al. Among authors: flavell aj. New Phytol. 2020 Dec;228(6):1852-1863. doi: 10.1111/nph.16810. Epub 2020 Aug 9. New Phytol. 2020. PMID: 32659029 Free article.

6

Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome.

Lyons M, Cardle L, Rostoks N, Waugh R, Flavell AJ. Lyons M, et al. Among authors: flavell aj. Mol Genet Genomics. 2008 Oct;280(4):275-85. doi: 10.1007/s00438-008-0363-0. Epub 2008 Jul 9. Mol Genet Genomics. 2008. PMID: 18612649

7

Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data.

Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR. Moragues M, et al. Among authors: flavell aj. Theor Appl Genet. 2010 May;120(8):1525-34. doi: 10.1007/s00122-010-1273-1. Epub 2010 Feb 16. Theor Appl Genet. 2010. PMID: 20157694

8

Flapjack--graphical genotype visualization.

Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WT, Flavell AJ, Marshall D. Milne I, et al. Among authors: flavell aj. Bioinformatics. 2010 Dec 15;26(24):3133-4. doi: 10.1093/bioinformatics/btq580. Epub 2010 Oct 18. Bioinformatics. 2010. PMID: 20956241 Free PMC article.

9

Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond.

Mascher M, Richmond TA, Gerhardt DJ, Himmelbach A, Clissold L, Sampath D, Ayling S, Steuernagel B, Pfeifer M, D'Ascenzo M, Akhunov ED, Hedley PE, Gonzales AM, Morrell PL, Kilian B, Blattner FR, Scholz U, Mayer KF, Flavell AJ, Muehlbauer GJ, Waugh R, Jeddeloh JA, Stein N. Mascher M, et al. Among authors: flavell aj. Plant J. 2013 Nov;76(3):494-505. doi: 10.1111/tpj.12294. Epub 2013 Aug 24. Plant J. 2013. PMID: 23889683 Free PMC article.

10

An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome.

Ribeiro A, Golicz A, Hackett CA, Milne I, Stephen G, Marshall D, Flavell AJ, Bayer M. Ribeiro A, et al. Among authors: flavell aj. BMC Bioinformatics. 2015 Nov 11;16:382. doi: 10.1186/s12859-015-0801-z. BMC Bioinformatics. 2015. PMID: 26558718 Free PMC article.

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