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A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples.
Naccache SN, Federman S, Veeraraghavan N, Zaharia M, Lee D, Samayoa E, Bouquet J, Greninger AL, Luk KC, Enge B, Wadford DA, Messenger SL, Genrich GL, Pellegrino K, Grard G, Leroy E, Schneider BS, Fair JN, Martínez MA, Isa P, Crump JA, DeRisi JL, Sittler T, Hackett J Jr, Miller S, Chiu CY. Naccache SN, et al. Among authors: crump ja. Genome Res. 2014 Jul;24(7):1180-92. doi: 10.1101/gr.171934.113. Epub 2014 Jun 4. Genome Res. 2014. PMID: 24899342 Free PMC article.
Performance Assessment of the Universal Vital Assessment Score vs Other Illness Severity Scores for Predicting Risk of In-Hospital Death Among Adult Febrile Inpatients in Northern Tanzania, 2016-2019.
Bonnewell JP, Rubach MP, Madut DB, Carugati M, Maze MJ, Kilonzo KG, Lyamuya F, Marandu A, Kalengo NH, Lwezaula BF, Mmbaga BT, Maro VP, Crump JA. Bonnewell JP, et al. Among authors: crump ja. JAMA Netw Open. 2021 Dec 1;4(12):e2136398. doi: 10.1001/jamanetworkopen.2021.36398. JAMA Netw Open. 2021. PMID: 34913982 Free PMC article.
Sensitivity of C-reactive protein for the identification of patients with laboratory-confirmed bacterial infections in northern Tanzania.
Althaus T, Lubell Y, Maro VP, Mmbaga BT, Lwezaula B, Halleux C, Biggs HM, Galloway RL, Stoddard RA, Perniciaro JL, Nicholson WL, Doyle K, Olliaro P, Crump JA, Rubach MP. Althaus T, et al. Among authors: crump ja. Trop Med Int Health. 2020 Mar;25(3):291-300. doi: 10.1111/tmi.13358. Epub 2020 Jan 6. Trop Med Int Health. 2020. PMID: 31808588 Free PMC article.
Total lymphocyte count and World Health Organization pediatric clinical stage as markers to assess need to initiate antiretroviral therapy among human immunodeficiency virus-infected children in Moshi, Northern Tanzania.
Johnson OO, Benjamin DK, Benjamin DK Jr, Schimana W, Tillekeratne LG, Crump JA, Landman KZ, Kinabo GD, Mmbaga B, Msuya LJ, Shao JF, Swai ME, Cunningham CK. Johnson OO, et al. Among authors: crump ja. Pediatr Infect Dis J. 2009 Jun;28(6):493-7. doi: 10.1097/INF.0b013e3181950b7f. Pediatr Infect Dis J. 2009. PMID: 19436238 Free PMC article.
317 results