Karim AS - Search Results

1

Design of synthetic yeast promoters via tuning of nucleosome architecture.

Curran KA, Crook NC, Karim AS, Gupta A, Wagman AM, Alper HS. Curran KA, et al. Among authors: karim as. Nat Commun. 2014 May 27;5:4002. doi: 10.1038/ncomms5002. Nat Commun. 2014. PMID: 24862902 Free PMC article.

2

Characterization of plasmid burden and copy number in Saccharomyces cerevisiae for optimization of metabolic engineering applications.

Karim AS, Curran KA, Alper HS. Karim AS, et al. FEMS Yeast Res. 2013 Feb;13(1):107-16. doi: 10.1111/1567-1364.12016. Epub 2012 Nov 20. FEMS Yeast Res. 2013. PMID: 23107142 Free PMC article.

3

Metabolic engineering of muconic acid production in Saccharomyces cerevisiae.

Curran KA, Leavitt JM, Karim AS, Alper HS. Curran KA, et al. Among authors: karim as. Metab Eng. 2013 Jan;15:55-66. doi: 10.1016/j.ymben.2012.10.003. Epub 2012 Nov 17. Metab Eng. 2013. PMID: 23164574

4

Use of expression-enhancing terminators in Saccharomyces cerevisiae to increase mRNA half-life and improve gene expression control for metabolic engineering applications.

Curran KA, Karim AS, Gupta A, Alper HS. Curran KA, et al. Among authors: karim as. Metab Eng. 2013 Sep;19:88-97. doi: 10.1016/j.ymben.2013.07.001. Epub 2013 Jul 12. Metab Eng. 2013. PMID: 23856240 Free PMC article.

5

Cell Extracts from Bacteria and Yeast Retain Metabolic Activity after Extended Storage and Repeated Thawing.

Rasor BJ, Karim AS, Alper HS, Jewett MC. Rasor BJ, et al. Among authors: karim as. ACS Synth Biol. 2023 Mar 17;12(3):904-908. doi: 10.1021/acssynbio.2c00685. Epub 2023 Feb 27. ACS Synth Biol. 2023. PMID: 36848582

6

Establishing a versatile toolkit of flux enhanced strains and cell extracts for pathway prototyping.

Yi X, Rasor BJ, Boadi N, Louie K, Northen TR, Karim AS, Jewett MC, Alper HS. Yi X, et al. Among authors: karim as. Metab Eng. 2023 Nov;80:241-253. doi: 10.1016/j.ymben.2023.10.008. Epub 2023 Oct 26. Metab Eng. 2023. PMID: 37890611

7

Deconstructing synthetic biology across scales: a conceptual approach for training synthetic biologists.

Karim AS, Brown DM, Archuleta CM, Grannan S, Aristilde L, Goyal Y, Leonard JN, Mangan NM, Prindle A, Rocklin GJ, Tyo KJ, Zoloth L, Jewett MC, Calkins S, Kamat NP, Tullman-Ercek D, Lucks JB. Karim AS, et al. Nat Commun. 2024 Jun 26;15(1):5425. doi: 10.1038/s41467-024-49626-x. Nat Commun. 2024. PMID: 38926339 Free PMC article. Review.

8

A rapid cell-free expression and screening platform for antibody discovery.

Hunt AC, Vögeli B, Hassan AO, Guerrero L, Kightlinger W, Yoesep DJ, Krüger A, DeWinter M, Diamond MS, Karim AS, Jewett MC. Hunt AC, et al. Among authors: karim as. Nat Commun. 2023 Jul 3;14(1):3897. doi: 10.1038/s41467-023-38965-w. Nat Commun. 2023. PMID: 37400446 Free PMC article.

9

Cell-free gene expression: an expanded repertoire of applications.

Silverman AD, Karim AS, Jewett MC. Silverman AD, et al. Among authors: karim as. Nat Rev Genet. 2020 Mar;21(3):151-170. doi: 10.1038/s41576-019-0186-3. Epub 2019 Nov 28. Nat Rev Genet. 2020. PMID: 31780816 Review.

10

Cell-free prototyping enables implementation of optimized reverse β-oxidation pathways in heterotrophic and autotrophic bacteria.

Vögeli B, Schulz L, Garg S, Tarasava K, Clomburg JM, Lee SH, Gonnot A, Moully EH, Kimmel BR, Tran L, Zeleznik H, Brown SD, Simpson SD, Mrksich M, Karim AS, Gonzalez R, Köpke M, Jewett MC. Vögeli B, et al. Among authors: karim as. Nat Commun. 2022 Jun 1;13(1):3058. doi: 10.1038/s41467-022-30571-6. Nat Commun. 2022. PMID: 35650184 Free PMC article.

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