Malmström L - Search Results

1

aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data.

Rosenberger G, Ludwig C, Röst HL, Aebersold R, Malmström L. Rosenberger G, et al. Among authors: malmstrom l. Bioinformatics. 2014 Sep 1;30(17):2511-3. doi: 10.1093/bioinformatics/btu200. Epub 2014 Apr 20. Bioinformatics. 2014. PMID: 24753486 Free PMC article.

2

Xwalk: computing and visualizing distances in cross-linking experiments.

Kahraman A, Malmström L, Aebersold R. Kahraman A, et al. Among authors: malmstrom l. Bioinformatics. 2011 Aug 1;27(15):2163-4. doi: 10.1093/bioinformatics/btr348. Epub 2011 Jun 11. Bioinformatics. 2011. PMID: 21666267 Free PMC article.

3

Quantitative proteomics of microbes: Principles and applications to virulence.

Malmström L, Malmström J, Aebersold R. Malmström L, et al. Among authors: malmstrom j. Proteomics. 2011 Aug;11(15):2947-56. doi: 10.1002/pmic.201100088. Epub 2011 Jul 4. Proteomics. 2011. PMID: 21726054 Review.

4

Streptococcus pyogenes in human plasma: adaptive mechanisms analyzed by mass spectrometry-based proteomics.

Malmström J, Karlsson C, Nordenfelt P, Ossola R, Weisser H, Quandt A, Hansson K, Aebersold R, Malmström L, Björck L. Malmström J, et al. Among authors: malmstrom l. J Biol Chem. 2012 Jan 6;287(2):1415-25. doi: 10.1074/jbc.M111.267674. Epub 2011 Nov 23. J Biol Chem. 2012. PMID: 22117078 Free PMC article.

5

openBIS: a flexible framework for managing and analyzing complex data in biology research.

Bauch A, Adamczyk I, Buczek P, Elmer FJ, Enimanev K, Glyzewski P, Kohler M, Pylak T, Quandt A, Ramakrishnan C, Beisel C, Malmström L, Aebersold R, Rinn B. Bauch A, et al. Among authors: malmstrom l. BMC Bioinformatics. 2011 Dec 8;12:468. doi: 10.1186/1471-2105-12-468. BMC Bioinformatics. 2011. PMID: 22151573 Free PMC article.

6

Automated workflow for large-scale selected reaction monitoring experiments.

Malmström L, Malmström J, Selevsek N, Rosenberger G, Aebersold R. Malmström L, et al. Among authors: malmstrom j. J Proteome Res. 2012 Mar 2;11(3):1644-53. doi: 10.1021/pr200844d. Epub 2012 Feb 10. J Proteome Res. 2012. PMID: 22283722

7

A computational tool to detect and avoid redundancy in selected reaction monitoring.

Röst H, Malmström L, Aebersold R. Röst H, et al. Among authors: malmstrom l. Mol Cell Proteomics. 2012 Aug;11(8):540-9. doi: 10.1074/mcp.M111.013045. Epub 2012 Apr 24. Mol Cell Proteomics. 2012. PMID: 22535207 Free PMC article.

8

Bioinformatic challenges in targeted proteomics.

Reker D, Malmström L. Reker D, et al. Among authors: malmstrom l. J Proteome Res. 2012 Sep 7;11(9):4393-402. doi: 10.1021/pr300276f. Epub 2012 Aug 23. J Proteome Res. 2012. PMID: 22866949

9

Structural probing of a protein phosphatase 2A network by chemical cross-linking and mass spectrometry.

Herzog F, Kahraman A, Boehringer D, Mak R, Bracher A, Walzthoeni T, Leitner A, Beck M, Hartl FU, Ban N, Malmström L, Aebersold R. Herzog F, et al. Among authors: malmstrom l. Science. 2012 Sep 14;337(6100):1348-52. doi: 10.1126/science.1221483. Science. 2012. PMID: 22984071

10

Proteome-wide selected reaction monitoring assays for the human pathogen Streptococcus pyogenes.

Karlsson C, Malmström L, Aebersold R, Malmström J. Karlsson C, et al. Among authors: malmstrom j, malmstrom l. Nat Commun. 2012;3:1301. doi: 10.1038/ncomms2297. Nat Commun. 2012. PMID: 23250431 Free PMC article.

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