Aebersold R - Search Results

1

aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data.

Rosenberger G, Ludwig C, Röst HL, Aebersold R, Malmström L. Rosenberger G, et al. Among authors: aebersold r. Bioinformatics. 2014 Sep 1;30(17):2511-3. doi: 10.1093/bioinformatics/btu200. Epub 2014 Apr 20. Bioinformatics. 2014. PMID: 24753486 Free PMC article.

2

Challenges and opportunities in proteomics data analysis.

Domon B, Aebersold R. Domon B, et al. Among authors: aebersold r. Mol Cell Proteomics. 2006 Oct;5(10):1921-6. doi: 10.1074/mcp.R600012-MCP200. Epub 2006 Aug 8. Mol Cell Proteomics. 2006. PMID: 16896060 Free article.

3

Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis.

Malmström J, Lee H, Nesvizhskii AI, Shteynberg D, Mohanty S, Brunner E, Ye M, Weber G, Eckerskorn C, Aebersold R. Malmström J, et al. Among authors: aebersold r. J Proteome Res. 2006 Sep;5(9):2241-9. doi: 10.1021/pr0600632. J Proteome Res. 2006. PMID: 16944936

4

Development and validation of a spectral library searching method for peptide identification from MS/MS.

Lam H, Deutsch EW, Eddes JS, Eng JK, King N, Stein SE, Aebersold R. Lam H, et al. Among authors: aebersold r. Proteomics. 2007 Mar;7(5):655-67. doi: 10.1002/pmic.200600625. Proteomics. 2007. PMID: 17295354

5

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools.

Klimek J, Eddes JS, Hohmann L, Jackson J, Peterson A, Letarte S, Gafken PR, Katz JE, Mallick P, Lee H, Schmidt A, Ossola R, Eng JK, Aebersold R, Martin DB. Klimek J, et al. Among authors: aebersold r. J Proteome Res. 2008 Jan;7(1):96-103. doi: 10.1021/pr070244j. Epub 2007 Aug 21. J Proteome Res. 2008. PMID: 17711323 Free PMC article.

6

SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling.

Mueller LN, Rinner O, Schmidt A, Letarte S, Bodenmiller B, Brusniak MY, Vitek O, Aebersold R, Müller M. Mueller LN, et al. Among authors: aebersold r. Proteomics. 2007 Oct;7(19):3470-80. doi: 10.1002/pmic.200700057. Proteomics. 2007. PMID: 17726677

7

An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data.

Mueller LN, Brusniak MY, Mani DR, Aebersold R. Mueller LN, et al. Among authors: aebersold r. J Proteome Res. 2008 Jan;7(1):51-61. doi: 10.1021/pr700758r. Epub 2008 Jan 4. J Proteome Res. 2008. PMID: 18173218 Review.

8

Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring.

Lange V, Malmström JA, Didion J, King NL, Johansson BP, Schäfer J, Rameseder J, Wong CH, Deutsch EW, Brusniak MY, Bühlmann P, Björck L, Domon B, Aebersold R. Lange V, et al. Among authors: aebersold r. Mol Cell Proteomics. 2008 Aug;7(8):1489-500. doi: 10.1074/mcp.M800032-MCP200. Epub 2008 Apr 13. Mol Cell Proteomics. 2008. PMID: 18408245 Free PMC article.

9

The protein information and property explorer: an easy-to-use, rich-client web application for the management and functional analysis of proteomic data.

Ramos H, Shannon P, Aebersold R. Ramos H, et al. Among authors: aebersold r. Bioinformatics. 2008 Sep 15;24(18):2110-1. doi: 10.1093/bioinformatics/btn363. Epub 2008 Jul 16. Bioinformatics. 2008. PMID: 18635572 Free PMC article.

10

MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis.

Hwang D, Zhang N, Lee H, Yi E, Zhang H, Lee IY, Hood L, Aebersold R. Hwang D, et al. Among authors: aebersold r. Bioinformatics. 2008 Nov 15;24(22):2641-2. doi: 10.1093/bioinformatics/btn491. Epub 2008 Sep 19. Bioinformatics. 2008. PMID: 18805798 Free PMC article.

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