Herschlag D - Search Results

1

Roles of long-range tertiary interactions in limiting dynamics of the Tetrahymena group I ribozyme.

Shi X, Bisaria N, Benz-Moy TL, Bonilla S, Pavlichin DS, Herschlag D. Shi X, et al. Among authors: herschlag d. J Am Chem Soc. 2014 May 7;136(18):6643-8. doi: 10.1021/ja413033d. Epub 2014 Apr 28. J Am Chem Soc. 2014. PMID: 24738560 Free PMC article.

2

Contributions of 2'-hydroxyl groups of the RNA substrate to binding and catalysis by the Tetrahymena ribozyme. An energetic picture of an active site composed of RNA.

Herschlag D, Eckstein F, Cech TR. Herschlag D, et al. Biochemistry. 1993 Aug 17;32(32):8299-311. doi: 10.1021/bi00083a034. Biochemistry. 1993. PMID: 7688572

The 2'-hydroxyl at position -1 exerts its large effect nearly exclusively on the chemical step [Herschlag, D., Eckstein, F., & Cech, T.R. (1993) Biochemistry (following paper in this issue)]. ...

The 2'-hydroxyl at position -1 exerts its large effect nearly exclusively on the chemical step [Herschlag, D., Eckstein, F., & …

3

The importance of being ribose at the cleavage site in the Tetrahymena ribozyme reaction.

Herschlag D, Eckstein F, Cech TR. Herschlag D, et al. Biochemistry. 1993 Aug 17;32(32):8312-21. doi: 10.1021/bi00083a035. Biochemistry. 1993. PMID: 7688573

4

Comparison of pH dependencies of the Tetrahymena ribozyme reactions with RNA 2'-substituted and phosphorothioate substrates reveals a rate-limiting conformational step.

Herschlag D, Khosla M. Herschlag D, et al. Biochemistry. 1994 May 3;33(17):5291-7. doi: 10.1021/bi00183a036. Biochemistry. 1994. PMID: 8172903

5

pH dependencies of the Tetrahymena ribozyme reveal an unconventional origin of an apparent pKa.

Knitt DS, Herschlag D. Knitt DS, et al. Among authors: herschlag d. Biochemistry. 1996 Feb 6;35(5):1560-70. doi: 10.1021/bi9521147. Biochemistry. 1996. PMID: 8634287

6

Mechanistic investigations of a ribozyme derived from the Tetrahymena group I intron: insights into catalysis and the second step of self-splicing.

Mei R, Herschlag D. Mei R, et al. Among authors: herschlag d. Biochemistry. 1996 May 7;35(18):5796-809. doi: 10.1021/bi9527653. Biochemistry. 1996. PMID: 8639540

7

Isolation of a local tertiary folding transition in the context of a globally folded RNA.

Narlikar GJ, Herschlag D. Narlikar GJ, et al. Among authors: herschlag d. Nat Struct Biol. 1996 Aug;3(8):701-10. doi: 10.1038/nsb0896-701. Nat Struct Biol. 1996. PMID: 8756329

8

Quantitating tertiary binding energies of 2' OH groups on the P1 duplex of the Tetrahymena ribozyme: intrinsic binding energy in an RNA enzyme.

Narlikar GJ, Khosla M, Usman N, Herschlag D. Narlikar GJ, et al. Among authors: herschlag d. Biochemistry. 1997 Mar 4;36(9):2465-77. doi: 10.1021/bi9610820. Biochemistry. 1997. PMID: 9054551

9

Direct demonstration of the catalytic role of binding interactions in an enzymatic reaction.

Narlikar GJ, Herschlag D. Narlikar GJ, et al. Among authors: herschlag d. Biochemistry. 1998 Jul 14;37(28):9902-11. doi: 10.1021/bi980495t. Biochemistry. 1998. PMID: 9665695

10

Specificity from steric restrictions in the guanosine binding pocket of a group I ribozyme.

Russell R, Herschlag D. Russell R, et al. Among authors: herschlag d. RNA. 1999 Feb;5(2):158-66. doi: 10.1017/s1355838299981839. RNA. 1999. PMID: 10024168 Free PMC article.

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