Ganapathiraju MK - Search Results

1

Predicting gene ontology annotations of orphan GWAS genes using protein-protein interactions.

Kuppuswamy U, Ananthasubramanian S, Wang Y, Balakrishnan N, Ganapathiraju MK. Kuppuswamy U, et al. Among authors: ganapathiraju mk. Algorithms Mol Biol. 2014 Apr 3;9(1):10. doi: 10.1186/1748-7188-9-10. Algorithms Mol Biol. 2014. PMID: 24708602 Free PMC article.

2

Evolutionary insights from suffix array-based genome sequence analysis.

Poddar A, Chandra N, Ganapathiraju M, Sekar K, Klein-Seetharaman J, Reddy R, Balakrishnan N. Poddar A, et al. J Biosci. 2007 Aug;32(5):871-81. doi: 10.1007/s12038-007-0087-z. J Biosci. 2007. PMID: 17914229

3

Transmembrane helix prediction using amino acid property features and latent semantic analysis.

Ganapathiraju M, Balakrishnan N, Reddy R, Klein-Seetharaman J. Ganapathiraju M, et al. BMC Bioinformatics. 2008;9 Suppl 1(Suppl 1):S4. doi: 10.1186/1471-2105-9-S1-S4. BMC Bioinformatics. 2008. PMID: 18315857 Free PMC article.

4

Mycobacterium tuberculosis and Clostridium difficille interactomes: demonstration of rapid development of computational system for bacterial interactome prediction.

Ananthasubramanian S, Metri R, Khetan A, Gupta A, Handen A, Chandra N, Ganapathiraju M. Ananthasubramanian S, et al. Microb Inform Exp. 2012 Mar 21;2:4. doi: 10.1186/2042-5783-2-4. Microb Inform Exp. 2012. PMID: 22587966 Free PMC article.

5

Suite of tools for statistical N-gram language modeling for pattern mining in whole genome sequences.

Ganapathiraju MK, Mitchell AD, Thahir M, Motwani K, Ananthasubramanian S. Ganapathiraju MK, et al. J Bioinform Comput Biol. 2012 Dec;10(6):1250016. doi: 10.1142/S0219720012500163. Epub 2012 Jul 22. J Bioinform Comput Biol. 2012. PMID: 22817111

6

Interactome of SARS-CoV-2 / nCoV19 modulated host proteins with computationally predicted PPIs.

Karunakaran KB, Balakrishnan N, Ganapathiraju MK. Karunakaran KB, et al. Among authors: ganapathiraju mk. Res Sq [Preprint]. 2020 May 13:rs.3.rs-28592. doi: 10.21203/rs.3.rs-28592/v1. Res Sq. 2020. PMID: 32702714 Free PMC article. Preprint.

7

Potentially repurposable drugs for COVID-19 identified from SARS-CoV-2 Host Protein Interactome.

Karunakaran KB, Balakrishnan N, Ganapathiraju M. Karunakaran KB, et al. Res Sq [Preprint]. 2020 May 28:rs.3.rs-30363. doi: 10.21203/rs.3.rs-30363/v1. Res Sq. 2020. PMID: 32702734 Free PMC article. Preprint.

8

Generalized and social anxiety disorder interactomes show distinctive overlaps with striosome and matrix interactomes.

Karunakaran KB, Amemori S, Balakrishnan N, Ganapathiraju MK, Amemori KI. Karunakaran KB, et al. Among authors: ganapathiraju mk. Sci Rep. 2021 Sep 15;11(1):18392. doi: 10.1038/s41598-021-97418-w. Sci Rep. 2021. PMID: 34526518 Free PMC article.

9

Novel Protein-Protein Interactions Highlighting the Crosstalk between Hypoplastic Left Heart Syndrome, Ciliopathies and Neurodevelopmental Delays.

Karunakaran KB, Gabriel GC, Balakrishnan N, Lo CW, Ganapathiraju MK. Karunakaran KB, et al. Among authors: ganapathiraju mk. Genes (Basel). 2022 Apr 1;13(4):627. doi: 10.3390/genes13040627. Genes (Basel). 2022. PMID: 35456433 Free PMC article.

10

Parkinson's disease and schizophrenia interactomes contain temporally distinct gene clusters underlying comorbid mechanisms and unique disease processes.

Karunakaran KB, Jain S, Brahmachari SK, Balakrishnan N, Ganapathiraju MK. Karunakaran KB, et al. Among authors: ganapathiraju mk. Schizophrenia (Heidelb). 2024 Feb 27;10(1):26. doi: 10.1038/s41537-024-00439-3. Schizophrenia (Heidelb). 2024. PMID: 38413605 Free PMC article.

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