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The complete genome sequence for putative H₂- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome.
Handley KM, Bartels D, O'Loughlin EJ, Williams KH, Trimble WL, Skinner K, Gilbert JA, Desai N, Glass EM, Paczian T, Wilke A, Antonopoulos D, Kemner KM, Meyer F. Handley KM, et al. Among authors: meyer f. Environ Microbiol. 2014 Nov;16(11):3443-62. doi: 10.1111/1462-2920.12453. Epub 2014 Apr 21. Environ Microbiol. 2014. PMID: 24628880
Draft genome sequence of Achromobacter piechaudii strain HLE.
Trimble WL, Phung le T, Meyer F, Silver S, Gilbert JA. Trimble WL, et al. Among authors: meyer f. J Bacteriol. 2012 Nov;194(22):6355. doi: 10.1128/JB.01660-12. J Bacteriol. 2012. PMID: 23105084 Free PMC article.
A metagenomics portal for a democratized sequencing world.
Wilke A, Glass EM, Bartels D, Bischof J, Braithwaite D, D'Souza M, Gerlach W, Harrison T, Keegan K, Matthews H, Kottmann R, Paczian T, Tang W, Trimble WL, Yilmaz P, Wilkening J, Desai N, Meyer F. Wilke A, et al. Among authors: meyer f. Methods Enzymol. 2013;531:487-523. doi: 10.1016/B978-0-12-407863-5.00022-8. Methods Enzymol. 2013. PMID: 24060134
A RESTful API for accessing microbial community data for MG-RAST.
Wilke A, Bischof J, Harrison T, Brettin T, D'Souza M, Gerlach W, Matthews H, Paczian T, Wilkening J, Glass EM, Desai N, Meyer F. Wilke A, et al. Among authors: meyer f. PLoS Comput Biol. 2015 Jan 8;11(1):e1004008. doi: 10.1371/journal.pcbi.1004008. eCollection 2015 Jan. PLoS Comput Biol. 2015. PMID: 25569221 Free PMC article.
Spatial scale drives patterns in soil bacterial diversity.
O'Brien SL, Gibbons SM, Owens SM, Hampton-Marcell J, Johnston ER, Jastrow JD, Gilbert JA, Meyer F, Antonopoulos DA. O'Brien SL, et al. Among authors: meyer f. Environ Microbiol. 2016 Jun;18(6):2039-51. doi: 10.1111/1462-2920.13231. Epub 2016 Mar 21. Environ Microbiol. 2016. PMID: 26914164 Free PMC article.
Connecting genotype to phenotype in the era of high-throughput sequencing.
Henry CS, Overbeek R, Xia F, Best AA, Glass E, Gilbert J, Larsen P, Edwards R, Disz T, Meyer F, Vonstein V, Dejongh M, Bartels D, Desai N, D'Souza M, Devoid S, Keegan KP, Olson R, Wilke A, Wilkening J, Stevens RL. Henry CS, et al. Among authors: meyer f. Biochim Biophys Acta. 2011 Oct;1810(10):967-77. doi: 10.1016/j.bbagen.2011.03.010. Epub 2011 Mar 21. Biochim Biophys Acta. 2011. PMID: 21421023 Review.
From genomics to metagenomics.
Desai N, Antonopoulos D, Gilbert JA, Glass EM, Meyer F. Desai N, et al. Among authors: meyer f. Curr Opin Biotechnol. 2012 Feb;23(1):72-6. doi: 10.1016/j.copbio.2011.12.017. Epub 2012 Jan 5. Curr Opin Biotechnol. 2012. PMID: 22227326 Review.
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