Prokop JW - Search Results

1

The C-terminal domain of SRA1p has a fold more similar to PRP18 than to an RRM and does not directly bind to the SRA1 RNA STR7 region.

Bilinovich SM, Davis CM, Morris DL, Ray LA, Prokop JW, Buchan GJ, Leeper TC. Bilinovich SM, et al. Among authors: prokop jw. J Mol Biol. 2014 Apr 17;426(8):1753-65. doi: 10.1016/j.jmb.2014.01.007. Epub 2014 Jan 29. J Mol Biol. 2014. PMID: 24486611

2

Amino acid function and docking site prediction through combining disease variants, structure alignments, sequence alignments, and molecular dynamics: a study of the HMG domain.

Prokop JW, Leeper TC, Duan ZH, Milsted A. Prokop JW, et al. BMC Bioinformatics. 2012 Mar 13;13 Suppl 2(Suppl 2):S3. doi: 10.1186/1471-2105-13-S2-S3. BMC Bioinformatics. 2012. PMID: 22536866 Free PMC article.

3

A method for in silico identification of SNAIL/SLUG DNA binding potentials to the E-box sequence using molecular dynamics and evolutionary conserved amino acids.

Prokop JW, Liu Y, Milsted A, Peng H, Rauscher FJ 3rd. Prokop JW, et al. J Mol Model. 2013 Sep;19(9):3463-9. doi: 10.1007/s00894-013-1876-y. Epub 2013 May 25. J Mol Model. 2013. PMID: 23708613 Free PMC article.

4

Structural libraries of protein models for multiple species to understand evolution of the renin-angiotensin system.

Prokop JW, Petri V, Shimoyama ME, Watanabe IK, Casarini DE, Leeper TC, Bilinovich SM, Jacob HJ, Santos RA, Martins AS, Araujo FC, Reis FM, Milsted A. Prokop JW, et al. Gen Comp Endocrinol. 2015 May 1;215:106-16. doi: 10.1016/j.ygcen.2014.09.010. Epub 2014 Sep 26. Gen Comp Endocrinol. 2015. PMID: 25260253 Free PMC article.

5

Differences in the Phosphorylation-Dependent Regulation of Prenylation of Rap1A and Rap1B.

Wilson JM, Prokop JW, Lorimer E, Ntantie E, Williams CL. Wilson JM, et al. Among authors: prokop jw. J Mol Biol. 2016 Dec 4;428(24 Pt B):4929-4945. doi: 10.1016/j.jmb.2016.10.016. Epub 2016 Oct 17. J Mol Biol. 2016. PMID: 27760305 Free PMC article.

6

Methylation specific targeting of a chromatin remodeling complex from sponges to humans.

Cramer JM, Pohlmann D, Gomez F, Mark L, Kornegay B, Hall C, Siraliev-Perez E, Walavalkar NM, Sperlazza MJ, Bilinovich S, Prokop JW, Hill AL, Williams DC Jr. Cramer JM, et al. Among authors: prokop jw. Sci Rep. 2017 Jan 17;7:40674. doi: 10.1038/srep40674. Sci Rep. 2017. PMID: 28094816 Free PMC article.

7

Genome sequencing in the clinic: the past, present, and future of genomic medicine.

Prokop JW, May T, Strong K, Bilinovich SM, Bupp C, Rajasekaran S, Worthey EA, Lazar J. Prokop JW, et al. Physiol Genomics. 2018 Aug 1;50(8):563-579. doi: 10.1152/physiolgenomics.00046.2018. Epub 2018 May 4. Physiol Genomics. 2018. PMID: 29727589 Free PMC article. Review.

8

Environmental Epigenetics of Diesel Particulate Matter Toxicogenomics.

Bilinovich SM, Lewis K, Thompson BL, Prokop JW, Campbell DB. Bilinovich SM, et al. Among authors: prokop jw. Int J Environ Res Public Health. 2020 Oct 10;17(20):7386. doi: 10.3390/ijerph17207386. Int J Environ Res Public Health. 2020. PMID: 33050454 Free PMC article.

9

A Human TSC1 Variant Screening Platform in Gabaergic Cortical Interneurons for Genotype to Phenotype Assessments.

Wundrach D, Martinetti LE, Stafford AM, Bilinovich SM, Angara K, Prokop JW, Crandall SR, Vogt D. Wundrach D, et al. Among authors: prokop jw. Front Mol Neurosci. 2020 Sep 18;13:573409. doi: 10.3389/fnmol.2020.573409. eCollection 2020. Front Mol Neurosci. 2020. PMID: 33071758 Free PMC article.

10

Integrated RNA Sequencing Reveals Epigenetic Impacts of Diesel Particulate Matter Exposure in Human Cerebral Organoids.

Bilinovich SM, Uhl KL, Lewis K, Soehnlen X, Williams M, Vogt D, Prokop JW, Campbell DB. Bilinovich SM, et al. Among authors: prokop jw. Dev Neurosci. 2020;42(5-6):195-207. doi: 10.1159/000513536. Epub 2021 Mar 3. Dev Neurosci. 2020. PMID: 33657557 Free PMC article.

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