De Simone A - Search Results

1

Interplay between peptide bond geometrical parameters in nonglobular structural contexts.

Esposito L, Balasco N, De Simone A, Berisio R, Vitagliano L. Esposito L, et al. Among authors: de simone a. Biomed Res Int. 2013;2013:326914. doi: 10.1155/2013/326914. Epub 2013 Dec 26. Biomed Res Int. 2013. PMID: 24455689 Free PMC article.

2

Correlation between omega and psi dihedral angles in protein structures.

Esposito L, De Simone A, Zagari A, Vitagliano L. Esposito L, et al. Among authors: de simone a. J Mol Biol. 2005 Apr 1;347(3):483-7. doi: 10.1016/j.jmb.2005.01.065. J Mol Biol. 2005. PMID: 15755444

3

Polyproline helices in protein structures: A statistical survey.

Berisio R, Loguercio S, De Simone A, Zagari A, Vitagliano L. Berisio R, et al. Among authors: de simone a. Protein Pept Lett. 2006;13(8):847-54. doi: 10.2174/092986606777841154. Protein Pept Lett. 2006. PMID: 17073732

4

Limited tendency of alpha-helical residues to form disulfide bridges: a structural explanation.

De Simone A, Berisio R, Zagari A, Vitagliano L. De Simone A, et al. J Pept Sci. 2006 Dec;12(12):740-7. doi: 10.1002/psc.809. J Pept Sci. 2006. PMID: 17131286

5

Structure, dynamics, and stability of assemblies of the human prion fragment SNQNNF.

De Simone A, Pedone C, Vitagliano L. De Simone A, et al. Biochem Biophys Res Commun. 2008 Feb 15;366(3):800-6. doi: 10.1016/j.bbrc.2007.12.047. Epub 2007 Dec 17. Biochem Biophys Res Commun. 2008. PMID: 18082625

6

Insights into stability and toxicity of amyloid-like oligomers by replica exchange molecular dynamics analyses.

De Simone A, Esposito L, Pedone C, Vitagliano L. De Simone A, et al. Biophys J. 2008 Aug;95(4):1965-73. doi: 10.1529/biophysj.108.129213. Epub 2008 May 9. Biophys J. 2008. PMID: 18469082 Free PMC article.

7

Role of hydration in collagen triple helix stabilization.

De Simone A, Vitagliano L, Berisio R. De Simone A, et al. Biochem Biophys Res Commun. 2008 Jul 18;372(1):121-5. doi: 10.1016/j.bbrc.2008.04.190. Epub 2008 May 15. Biochem Biophys Res Commun. 2008. PMID: 18485893

8

Stability of single sheet GNNQQNY aggregates analyzed by replica exchange molecular dynamics: antiparallel versus parallel association.

Vitagliano L, Esposito L, Pedone C, De Simone A. Vitagliano L, et al. Among authors: de simone a. Biochem Biophys Res Commun. 2008 Dec 26;377(4):1036-41. doi: 10.1016/j.bbrc.2008.10.039. Epub 2008 Oct 18. Biochem Biophys Res Commun. 2008. PMID: 18938138

9

Role of side chains in collagen triple helix stabilization and partner recognition.

Berisio R, De Simone A, Ruggiero A, Improta R, Vitagliano L. Berisio R, et al. Among authors: de simone a. J Pept Sci. 2009 Mar;15(3):131-40. doi: 10.1002/psc.1082. J Pept Sci. 2009. PMID: 19053070 Review.

10

Dynamics and stability of amyloid-like steric zipper assemblies with hydrophobic dry interfaces.

Vitagliano L, Stanzione F, De Simone A, Esposito L. Vitagliano L, et al. Among authors: de simone a. Biopolymers. 2009 Dec;91(12):1161-71. doi: 10.1002/bip.21182. Biopolymers. 2009. PMID: 19280623

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