Shen L - Search Results

1

Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing.

Kunde-Ramamoorthy G, Coarfa C, Laritsky E, Kessler NJ, Harris RA, Xu M, Chen R, Shen L, Milosavljevic A, Waterland RA. Kunde-Ramamoorthy G, et al. Among authors: shen l. Nucleic Acids Res. 2014 Apr;42(6):e43. doi: 10.1093/nar/gkt1325. Epub 2014 Jan 3. Nucleic Acids Res. 2014. PMID: 24391148 Free PMC article.

2

Methods of DNA methylation analysis.

Shen L, Waterland RA. Shen L, et al. Curr Opin Clin Nutr Metab Care. 2007 Sep;10(5):576-81. doi: 10.1097/MCO.0b013e3282bf6f43. Curr Opin Clin Nutr Metab Care. 2007. PMID: 17693740 Review.

3

Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters.

Shen L, Kondo Y, Guo Y, Zhang J, Zhang L, Ahmed S, Shu J, Chen X, Waterland RA, Issa JP. Shen L, et al. PLoS Genet. 2007 Oct;3(10):2023-36. doi: 10.1371/journal.pgen.0030181. Epub 2007 Sep 10. PLoS Genet. 2007. PMID: 17967063 Free PMC article.

4

Understanding the development of human bladder cancer by using a whole-organ genomic mapping strategy.

Majewski T, Lee S, Jeong J, Yoon DS, Kram A, Kim MS, Tuziak T, Bondaruk J, Lee S, Park WS, Tang KS, Chung W, Shen L, Ahmed SS, Johnston DA, Grossman HB, Dinney CP, Zhou JH, Harris RA, Snyder C, Filipek S, Narod SA, Watson P, Lynch HT, Gazdar A, Bar-Eli M, Wu XF, McConkey DJ, Baggerly K, Issa JP, Benedict WF, Scherer SE, Czerniak B. Majewski T, et al. Among authors: shen l. Lab Invest. 2008 Jul;88(7):694-721. doi: 10.1038/labinvest.2008.27. Epub 2008 May 5. Lab Invest. 2008. PMID: 18458673 Free PMC article.

5

Epigenomic profiling indicates a role for DNA methylation in early postnatal liver development.

Waterland RA, Kellermayer R, Rached MT, Tatevian N, Gomes MV, Zhang J, Zhang L, Chakravarty A, Zhu W, Laritsky E, Zhang W, Wang X, Shen L. Waterland RA, et al. Among authors: shen l. Hum Mol Genet. 2009 Aug 15;18(16):3026-38. doi: 10.1093/hmg/ddp241. Epub 2009 May 20. Hum Mol Genet. 2009. PMID: 19457928 Free PMC article.

6

Epigenetic maturation in colonic mucosa continues beyond infancy in mice.

Kellermayer R, Balasa A, Zhang W, Lee S, Mirza S, Chakravarty A, Szigeti R, Laritsky E, Tatevian N, Smith CW, Shen L, Waterland RA. Kellermayer R, et al. Among authors: shen l. Hum Mol Genet. 2010 Jun 1;19(11):2168-76. doi: 10.1093/hmg/ddq095. Epub 2010 Mar 2. Hum Mol Genet. 2010. PMID: 20197410 Free PMC article.

7

Season of conception in rural gambia affects DNA methylation at putative human metastable epialleles.

Waterland RA, Kellermayer R, Laritsky E, Rayco-Solon P, Harris RA, Travisano M, Zhang W, Torskaya MS, Zhang J, Shen L, Manary MJ, Prentice AM. Waterland RA, et al. Among authors: shen l. PLoS Genet. 2010 Dec 23;6(12):e1001252. doi: 10.1371/journal.pgen.1001252. PLoS Genet. 2010. PMID: 21203497 Free PMC article.

8

Repetitive elements and enforced transcriptional repression co-operate to enhance DNA methylation spreading into a promoter CpG-island.

Zhang Y, Shu J, Si J, Shen L, Estecio MR, Issa JP. Zhang Y, et al. Among authors: shen l. Nucleic Acids Res. 2012 Aug;40(15):7257-68. doi: 10.1093/nar/gks429. Epub 2012 May 17. Nucleic Acids Res. 2012. PMID: 22600741 Free PMC article.

9

Developmentally programmed 3' CpG island methylation confers tissue- and cell-type-specific transcriptional activation.

Yu DH, Ware C, Waterland RA, Zhang J, Chen MH, Gadkari M, Kunde-Ramamoorthy G, Nosavanh LM, Shen L. Yu DH, et al. Among authors: shen l. Mol Cell Biol. 2013 May;33(9):1845-58. doi: 10.1128/MCB.01124-12. Epub 2013 Mar 4. Mol Cell Biol. 2013. PMID: 23459939 Free PMC article.

10

Major epigenetic development distinguishing neuronal and non-neuronal cells occurs postnatally in the murine hypothalamus.

Li G, Zhang W, Baker MS, Laritsky E, Mattan-Hung N, Yu D, Kunde-Ramamoorthy G, Simerly RB, Chen R, Shen L, Waterland RA. Li G, et al. Among authors: shen l. Hum Mol Genet. 2014 Mar 15;23(6):1579-90. doi: 10.1093/hmg/ddt548. Epub 2013 Nov 1. Hum Mol Genet. 2014. PMID: 24186871 Free PMC article.

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