Raiber EA - Search Results

1

A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation.

Iurlaro M, Ficz G, Oxley D, Raiber EA, Bachman M, Booth MJ, Andrews S, Balasubramanian S, Reik W. Iurlaro M, et al. Among authors: raiber ea. Genome Biol. 2013;14(10):R119. doi: 10.1186/gb-2013-14-10-r119. Genome Biol. 2013. PMID: 24156278 Free PMC article.

2

Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase.

Raiber EA, Beraldi D, Ficz G, Burgess HE, Branco MR, Murat P, Oxley D, Booth MJ, Reik W, Balasubramanian S. Raiber EA, et al. Genome Biol. 2012 Aug 17;13(8):R69. doi: 10.1186/gb-2012-13-8-r69. Genome Biol. 2012. PMID: 22902005 Free PMC article.

3

In vivo genome-wide profiling reveals a tissue-specific role for 5-formylcytosine.

Iurlaro M, McInroy GR, Burgess HE, Dean W, Raiber EA, Bachman M, Beraldi D, Balasubramanian S, Reik W. Iurlaro M, et al. Among authors: raiber ea. Genome Biol. 2016 Jun 29;17(1):141. doi: 10.1186/s13059-016-1001-5. Genome Biol. 2016. PMID: 27356509 Free PMC article.

4

Chemical methods for decoding cytosine modifications in DNA.

Booth MJ, Raiber EA, Balasubramanian S. Booth MJ, et al. Among authors: raiber ea. Chem Rev. 2015 Mar 25;115(6):2240-54. doi: 10.1021/cr5002904. Epub 2014 Aug 5. Chem Rev. 2015. PMID: 25094039 Free PMC article. Review. No abstract available.

5

5-Formylcytosine organizes nucleosomes and forms Schiff base interactions with histones in mouse embryonic stem cells.

Raiber EA, Portella G, Martínez Cuesta S, Hardisty R, Murat P, Li Z, Iurlaro M, Dean W, Spindel J, Beraldi D, Liu Z, Dawson MA, Reik W, Balasubramanian S. Raiber EA, et al. Nat Chem. 2018 Dec;10(12):1258-1266. doi: 10.1038/s41557-018-0149-x. Epub 2018 Oct 22. Nat Chem. 2018. PMID: 30349137 Free article.

6

5-Formylcytosine alters the structure of the DNA double helix.

Raiber EA, Murat P, Chirgadze DY, Beraldi D, Luisi BF, Balasubramanian S. Raiber EA, et al. Nat Struct Mol Biol. 2015 Jan;22(1):44-49. doi: 10.1038/nsmb.2936. Epub 2014 Dec 15. Nat Struct Mol Biol. 2015. PMID: 25504322 Free PMC article.

7

A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro.

Raiber EA, Kranaster R, Lam E, Nikan M, Balasubramanian S. Raiber EA, et al. Nucleic Acids Res. 2012 Feb;40(4):1499-508. doi: 10.1093/nar/gkr882. Epub 2011 Oct 22. Nucleic Acids Res. 2012. PMID: 22021377 Free PMC article.

8

Chemical biology of genomic DNA: minimizing PCR bias.

McInroy GR, Raiber EA, Balasubramanian S. McInroy GR, et al. Among authors: raiber ea. Chem Commun (Camb). 2014 Oct 18;50(81):12047-9. doi: 10.1039/c4cc05107f. Chem Commun (Camb). 2014. PMID: 25178041 Free PMC article.

9

Enhanced Methylation Analysis by Recovery of Unsequenceable Fragments.

McInroy GR, Beraldi D, Raiber EA, Modrzynska K, van Delft P, Billker O, Balasubramanian S. McInroy GR, et al. Among authors: raiber ea. PLoS One. 2016 Mar 31;11(3):e0152322. doi: 10.1371/journal.pone.0152322. eCollection 2016. PLoS One. 2016. PMID: 27031619 Free PMC article.

10

Base resolution maps reveal the importance of 5-hydroxymethylcytosine in a human glioblastoma.

Raiber EA, Beraldi D, Martínez Cuesta S, McInroy GR, Kingsbury Z, Becq J, James T, Lopes M, Allinson K, Field S, Humphray S, Santarius T, Watts C, Bentley D, Balasubramanian S. Raiber EA, et al. NPJ Genom Med. 2017 Mar 13;2:6. doi: 10.1038/s41525-017-0007-6. eCollection 2017. NPJ Genom Med. 2017. PMID: 29263824 Free PMC article.

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