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Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean.
Innes RW, Ameline-Torregrosa C, Ashfield T, Cannon E, Cannon SB, Chacko B, Chen NW, Couloux A, Dalwani A, Denny R, Deshpande S, Egan AN, Glover N, Hans CS, Howell S, Ilut D, Jackson S, Lai H, Mammadov J, Del Campo SM, Metcalf M, Nguyen A, O'Bleness M, Pfeil BE, Podicheti R, Ratnaparkhe MB, Samain S, Sanders I, Ségurens B, Sévignac M, Sherman-Broyles S, Thareau V, Tucker DM, Walling J, Wawrzynski A, Yi J, Doyle JJ, Geffroy V, Roe BA, Maroof MA, Young ND. Innes RW, et al. Plant Physiol. 2008 Dec;148(4):1740-59. doi: 10.1104/pp.108.127902. Epub 2008 Oct 8. Plant Physiol. 2008. PMID: 18842825 Free PMC article.
Sequencing crop genomes: approaches and applications.
Jackson SA, Iwata A, Lee SH, Schmutz J, Shoemaker R. Jackson SA, et al. New Phytol. 2011 Sep;191(4):915-925. doi: 10.1111/j.1469-8137.2011.03804.x. Epub 2011 Jun 27. New Phytol. 2011. PMID: 21707621 Free article. Review.
Identification and characterization of functional centromeres of the common bean.
Iwata A, Tek AL, Richard MM, Abernathy B, Fonsêca A, Schmutz J, Chen NW, Thareau V, Magdelenat G, Li Y, Murata M, Pedrosa-Harand A, Geffroy V, Nagaki K, Jackson SA. Iwata A, et al. Among authors: jackson sa. Plant J. 2013 Oct;76(1):47-60. doi: 10.1111/tpj.12269. Epub 2013 Aug 5. Plant J. 2013. PMID: 23795942 Free article.
A reference genome for common bean and genome-wide analysis of dual domestications.
Schmutz J, McClean PE, Mamidi S, Wu GA, Cannon SB, Grimwood J, Jenkins J, Shu S, Song Q, Chavarro C, Torres-Torres M, Geffroy V, Moghaddam SM, Gao D, Abernathy B, Barry K, Blair M, Brick MA, Chovatia M, Gepts P, Goodstein DM, Gonzales M, Hellsten U, Hyten DL, Jia G, Kelly JD, Kudrna D, Lee R, Richard MM, Miklas PN, Osorno JM, Rodrigues J, Thareau V, Urrea CA, Wang M, Yu Y, Zhang M, Wing RA, Cregan PB, Rokhsar DS, Jackson SA. Schmutz J, et al. Among authors: jackson sa. Nat Genet. 2014 Jul;46(7):707-13. doi: 10.1038/ng.3008. Epub 2014 Jun 8. Nat Genet. 2014. PMID: 24908249 Free PMC article.
415 results