Gubian S - Search Results

1

Confero: an integrated contrast data and gene set platform for computational analysis and biological interpretation of omics data.

Hermida L, Poussin C, Stadler MB, Gubian S, Sewer A, Gaidatzis D, Hotz HR, Martin F, Belcastro V, Cano S, Peitsch MC, Hoeng J. Hermida L, et al. Among authors: gubian s. BMC Genomics. 2013 Jul 29;14:514. doi: 10.1186/1471-2164-14-514. BMC Genomics. 2013. PMID: 23895370 Free PMC article.

2

NPA: an R package for computing network perturbation amplitudes using gene expression data and two-layer networks.

Martin F, Gubian S, Talikka M, Hoeng J, Peitsch MC. Martin F, et al. Among authors: gubian s. BMC Bioinformatics. 2019 Sep 3;20(1):451. doi: 10.1186/s12859-019-3016-x. BMC Bioinformatics. 2019. PMID: 31481014 Free PMC article.

3

Assessment of a novel multi-array normalization method based on spike-in control probes suitable for microRNA datasets with global decreases in expression.

Sewer A, Gubian S, Kogel U, Veljkovic E, Han W, Hengstermann A, Peitsch MC, Hoeng J. Sewer A, et al. Among authors: gubian s. BMC Res Notes. 2014 May 17;7:302. doi: 10.1186/1756-0500-7-302. BMC Res Notes. 2014. PMID: 24886675 Free PMC article.

4

Construction of a Suite of Computable Biological Network Models Focused on Mucociliary Clearance in the Respiratory Tract.

Yepiskoposyan H, Talikka M, Vavassori S, Martin F, Sewer A, Gubian S, Luettich K, Peitsch MC, Hoeng J. Yepiskoposyan H, et al. Among authors: gubian s. Front Genet. 2019 Feb 15;10:87. doi: 10.3389/fgene.2019.00087. eCollection 2019. Front Genet. 2019. PMID: 30828347 Free PMC article.

5

Multi-omics systems toxicology study of mouse lung assessing the effects of aerosols from two heat-not-burn tobacco products and cigarette smoke.

Titz B, Szostak J, Sewer A, Phillips B, Nury C, Schneider T, Dijon S, Lavrynenko O, Elamin A, Guedj E, Tsin Wong E, Lebrun S, Vuillaume G, Kondylis A, Gubian S, Cano S, Leroy P, Keppler B, Ivanov NV, Vanscheeuwijck P, Martin F, Peitsch MC, Hoeng J. Titz B, et al. Among authors: gubian s. Comput Struct Biotechnol J. 2020 Apr 25;18:1056-1073. doi: 10.1016/j.csbj.2020.04.011. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32419906 Free PMC article.

6

Systems biology approach highlights mechanistic differences between Crohn's disease and ulcerative colitis.

Ruiz Castro PA, Yepiskoposyan H, Gubian S, Calvino-Martin F, Kogel U, Renggli K, Peitsch MC, Hoeng J, Talikka M. Ruiz Castro PA, et al. Among authors: gubian s. Sci Rep. 2021 Jun 1;11(1):11519. doi: 10.1038/s41598-021-91124-3. Sci Rep. 2021. PMID: 34075172 Free PMC article.

7

Causal biological network models for reactive astrogliosis: a systems approach to neuroinflammation.

Barkhuizen M, Renggli K, Gubian S, Peitsch MC, Mathis C, Talikka M. Barkhuizen M, et al. Among authors: gubian s. Sci Rep. 2022 Mar 10;12(1):4205. doi: 10.1038/s41598-022-07651-0. Sci Rep. 2022. PMID: 35273209 Free PMC article.

8

Systems Toxicology Approach for Assessing Developmental Neurotoxicity in Larval Zebrafish.

Li RA, Talikka M, Gubian S, Vom Berg C, Martin F, Peitsch MC, Hoeng J, Zupanic A. Li RA, et al. Among authors: gubian s. Front Genet. 2021 Jun 15;12:652632. doi: 10.3389/fgene.2021.652632. eCollection 2021. Front Genet. 2021. PMID: 34211495 Free PMC article.

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