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Page 1
A new system for comparative functional genomics of Saccharomyces yeasts.
Caudy AA, Guan Y, Jia Y, Hansen C, DeSevo C, Hayes AP, Agee J, Alvarez-Dominguez JR, Arellano H, Barrett D, Bauerle C, Bisaria N, Bradley PH, Breunig JS, Bush E, Cappel D, Capra E, Chen W, Clore J, Combs PA, Doucette C, Demuren O, Fellowes P, Freeman S, Frenkel E, Gadala-Maria D, Gawande R, Glass D, Grossberg S, Gupta A, Hammonds-Odie L, Hoisos A, Hsi J, Hsu YH, Inukai S, Karczewski KJ, Ke X, Kojima M, Leachman S, Lieber D, Liebowitz A, Liu J, Liu Y, Martin T, Mena J, Mendoza R, Myhrvold C, Millian C, Pfau S, Raj S, Rich M, Rokicki J, Rounds W, Salazar M, Salesi M, Sharma R, Silverman S, Singer C, Sinha S, Staller M, Stern P, Tang H, Weeks S, Weidmann M, Wolf A, Young C, Yuan J, Crutchfield C, McClean M, Murphy CT, Llinás M, Botstein D, Troyanskaya OG, Dunham MJ. Caudy AA, et al. Among authors: troyanskaya og. Genetics. 2013 Sep;195(1):275-87. doi: 10.1534/genetics.113.152918. Epub 2013 Jul 12. Genetics. 2013. PMID: 23852385 Free PMC article.
Finding function: evaluation methods for functional genomic data.
Myers CL, Barrett DR, Hibbs MA, Huttenhower C, Troyanskaya OG. Myers CL, et al. Among authors: troyanskaya og. BMC Genomics. 2006 Jul 25;7:187. doi: 10.1186/1471-2164-7-187. BMC Genomics. 2006. PMID: 16869964 Free PMC article.
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.
Peña-Castillo L, Tasan M, Myers CL, Lee H, Joshi T, Zhang C, Guan Y, Leone M, Pagnani A, Kim WK, Krumpelman C, Tian W, Obozinski G, Qi Y, Mostafavi S, Lin GN, Berriz GF, Gibbons FD, Lanckriet G, Qiu J, Grant C, Barutcuoglu Z, Hill DP, Warde-Farley D, Grouios C, Ray D, Blake JA, Deng M, Jordan MI, Noble WS, Morris Q, Klein-Seetharaman J, Bar-Joseph Z, Chen T, Sun F, Troyanskaya OG, Marcotte EM, Xu D, Hughes TR, Roth FP. Peña-Castillo L, et al. Among authors: troyanskaya og. Genome Biol. 2008;9 Suppl 1(Suppl 1):S2. doi: 10.1186/gb-2008-9-s1-s2. Epub 2008 Jun 27. Genome Biol. 2008. PMID: 18613946 Free PMC article.
A genomewide functional network for the laboratory mouse.
Guan Y, Myers CL, Lu R, Lemischka IR, Bult CJ, Troyanskaya OG. Guan Y, et al. Among authors: troyanskaya og. PLoS Comput Biol. 2008 Sep 26;4(9):e1000165. doi: 10.1371/journal.pcbi.1000165. PLoS Comput Biol. 2008. PMID: 18818725 Free PMC article.
Predicting cellular growth from gene expression signatures.
Airoldi EM, Huttenhower C, Gresham D, Lu C, Caudy AA, Dunham MJ, Broach JR, Botstein D, Troyanskaya OG. Airoldi EM, et al. Among authors: troyanskaya og. PLoS Comput Biol. 2009 Jan;5(1):e1000257. doi: 10.1371/journal.pcbi.1000257. Epub 2009 Jan 2. PLoS Comput Biol. 2009. PMID: 19119411 Free PMC article.
171 results