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Genome analyses of the sunflower pathogen Plasmopara halstedii provide insights into effector evolution in downy mildews and Phytophthora.
Sharma R, Xia X, Cano LM, Evangelisti E, Kemen E, Judelson H, Oome S, Sambles C, van den Hoogen DJ, Kitner M, Klein J, Meijer HJ, Spring O, Win J, Zipper R, Bode HB, Govers F, Kamoun S, Schornack S, Studholme DJ, Van den Ackerveken G, Thines M. Sharma R, et al. BMC Genomics. 2015 Oct 5;16:741. doi: 10.1186/s12864-015-1904-7. BMC Genomics. 2015. PMID: 26438312 Free PMC article.
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen Phytophthora capsici.
Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, Kuo A, Miller NA, Rice BJ, Raffaele S, Cano LM, Bharti AK, Donahoo RS, Finley S, Huitema E, Hulvey J, Platt D, Salamov A, Savidor A, Sharma R, Stam R, Storey D, Thines M, Win J, Haas BJ, Dinwiddie DL, Jenkins J, Knight JR, Affourtit JP, Han CS, Chertkov O, Lindquist EA, Detter C, Grigoriev IV, Kamoun S, Kingsmore SF. Lamour KH, et al. Among authors: sharma r. Mol Plant Microbe Interact. 2012 Oct;25(10):1350-60. doi: 10.1094/MPMI-02-12-0028-R. Mol Plant Microbe Interact. 2012. PMID: 22712506 Free PMC article.
The Genome of Peronospora belbahrii Reveals High Heterozygosity, a Low Number of Canonical Effectors, and TC-Rich Promoters.
Thines M, Sharma R, Rodenburg SYA, Gogleva A, Judelson HS, Xia X, van den Hoogen J, Kitner M, Klein J, Neilen M, de Ridder D, Seidl MF, van den Ackerveken G, Govers F, Schornack S, Studholme DJ. Thines M, et al. Among authors: sharma r. Mol Plant Microbe Interact. 2020 May;33(5):742-753. doi: 10.1094/MPMI-07-19-0211-R. Epub 2020 Apr 1. Mol Plant Microbe Interact. 2020. PMID: 32237964 Free article.
The fungal core effector Pep1 is conserved across smuts of dicots and monocots.
Hemetsberger C, Mueller AN, Matei A, Herrberger C, Hensel G, Kumlehn J, Mishra B, Sharma R, Thines M, Hückelhoven R, Doehlemann G. Hemetsberger C, et al. Among authors: sharma r. New Phytol. 2015 May;206(3):1116-1126. doi: 10.1111/nph.13304. Epub 2015 Jan 27. New Phytol. 2015. PMID: 25628012 Free article.
The genome sequence of the commercially cultivated mushroom Agrocybe aegerita reveals a conserved repertoire of fruiting-related genes and a versatile suite of biopolymer-degrading enzymes.
Gupta DK, Rühl M, Mishra B, Kleofas V, Hofrichter M, Herzog R, Pecyna MJ, Sharma R, Kellner H, Hennicke F, Thines M. Gupta DK, et al. Among authors: sharma r. BMC Genomics. 2018 Jan 15;19(1):48. doi: 10.1186/s12864-017-4430-y. BMC Genomics. 2018. PMID: 29334897 Free PMC article.
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