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SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner.
Luo R, Wong T, Zhu J, Liu CM, Zhu X, Wu E, Lee LK, Lin H, Zhu W, Cheung DW, Ting HF, Yiu SM, Peng S, Yu C, Li Y, Li R, Lam TW. Luo R, et al. Among authors: cheung dw. PLoS One. 2013 May 31;8(5):e65632. doi: 10.1371/journal.pone.0065632. Print 2013. PLoS One. 2013. PMID: 23741504 Free PMC article.
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.
Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, Tang J, Wu G, Zhang H, Shi Y, Liu Y, Yu C, Wang B, Lu Y, Han C, Cheung DW, Yiu SM, Peng S, Xiaoqian Z, Liu G, Liao X, Li Y, Yang H, Wang J, Lam TW, Wang J. Luo R, et al. Among authors: cheung dw. Gigascience. 2012 Dec 27;1(1):18. doi: 10.1186/2047-217X-1-18. Gigascience. 2012. PMID: 23587118 Free PMC article.
Erratum: SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.
Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, Tang J, Wu G, Zhang H, Shi Y, Liu Y, Yu C, Wang B, Lu Y, Han C, Cheung DW, Yiu SM, Peng S, Xiaoqian Z, Liu G, Liao X, Li Y, Yang H, Wang J, Lam TW, Wang J. Luo R, et al. Among authors: cheung dw. Gigascience. 2015 Jul 8;4:30. doi: 10.1186/s13742-015-0069-2. eCollection 2015. Gigascience. 2015. PMID: 26161257 Free PMC article.
GLProbs: Aligning Multiple Sequences Adaptively.
Ye Y, Cheung DW, Wang Y, Yiu SM, Zhan Q, Lam TW, Ting HF. Ye Y, et al. Among authors: cheung dw. IEEE/ACM Trans Comput Biol Bioinform. 2015 Jan-Feb;12(1):67-78. doi: 10.1109/TCBB.2014.2316820. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26357079
On mining micro-array data by Order-Preserving Submatrix.
Cheung L, Cheung DW, Kao B, Yip KY; Michael K. Ng. Cheung L, et al. Among authors: cheung dw. Int J Bioinform Res Appl. 2007;3(1):42-64. doi: 10.1504/IJBRA.2007.011834. Int J Bioinform Res Appl. 2007. PMID: 18048172
Identifying projected clusters from gene expression profiles.
Yip KY, Cheung DW, Ng MK, Cheung KH. Yip KY, et al. Among authors: cheung kh, cheung dw. J Biomed Inform. 2004 Oct;37(5):345-57. doi: 10.1016/j.jbi.2004.05.002. J Biomed Inform. 2004. PMID: 15488748 Free article.
69 results