Marx KA - Search Results

1

Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrin.

Kononova O, Litvinov RI, Zhmurov A, Alekseenko A, Cheng CH, Agarwal S, Marx KA, Weisel JW, Barsegov V. Kononova O, et al. Among authors: marx ka. J Biol Chem. 2013 Aug 2;288(31):22681-92. doi: 10.1074/jbc.M113.472365. Epub 2013 May 28. J Biol Chem. 2013. PMID: 23720752 Free PMC article.

2

SOP-GPU: influence of solvent-induced hydrodynamic interactions on dynamic structural transitions in protein assemblies.

Alekseenko A, Kononova O, Kholodov Y, Marx KA, Barsegov V. Alekseenko A, et al. Among authors: marx ka. J Comput Chem. 2016 Jun 30;37(17):1537-51. doi: 10.1002/jcc.24368. Epub 2016 Mar 26. J Comput Chem. 2016. PMID: 27015749 Free PMC article.

3

Regulatory element in fibrin triggers tension-activated transition from catch to slip bonds.

Litvinov RI, Kononova O, Zhmurov A, Marx KA, Barsegov V, Thirumalai D, Weisel JW. Litvinov RI, et al. Among authors: marx ka. Proc Natl Acad Sci U S A. 2018 Aug 21;115(34):8575-8580. doi: 10.1073/pnas.1802576115. Epub 2018 Aug 7. Proc Natl Acad Sci U S A. 2018. PMID: 30087181 Free PMC article.

4

Comparative simulation studies of native and single-site mutant human beta-defensin-1 peptides.

Toubar RA, Zhmurov A, Barsegov V, Marx KA. Toubar RA, et al. Among authors: marx ka. J Biomol Struct Dyn. 2013;31(2):174-94. doi: 10.1080/07391102.2012.698381. Epub 2012 Jul 25. J Biomol Struct Dyn. 2013. PMID: 22830355

5

Structural transitions and energy landscape for Cowpea Chlorotic Mottle Virus capsid mechanics from nanomanipulation in vitro and in silico.

Kononova O, Snijder J, Brasch M, Cornelissen J, Dima RI, Marx KA, Wuite GJ, Roos WH, Barsegov V. Kononova O, et al. Among authors: marx ka. Biophys J. 2013 Oct 15;105(8):1893-903. doi: 10.1016/j.bpj.2013.08.032. Biophys J. 2013. PMID: 24138865 Free PMC article.

6

Tubulin bond energies and microtubule biomechanics determined from nanoindentation in silico.

Kononova O, Kholodov Y, Theisen KE, Marx KA, Dima RI, Ataullakhanov FI, Grishchuk EL, Barsegov V. Kononova O, et al. Among authors: marx ka. J Am Chem Soc. 2014 Dec 10;136(49):17036-45. doi: 10.1021/ja506385p. Epub 2014 Nov 25. J Am Chem Soc. 2014. PMID: 25389565 Free PMC article.

7

Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles.

Kononova O, Snijder J, Kholodov Y, Marx KA, Wuite GJ, Roos WH, Barsegov V. Kononova O, et al. Among authors: marx ka. PLoS Comput Biol. 2016 Jan 28;12(1):e1004729. doi: 10.1371/journal.pcbi.1004729. eCollection 2016 Jan. PLoS Comput Biol. 2016. PMID: 26821264 Free PMC article.

8

Dynamic Transition from α-Helices to β-Sheets in Polypeptide Coiled-Coil Motifs.

Minin KA, Zhmurov A, Marx KA, Purohit PK, Barsegov V. Minin KA, et al. Among authors: marx ka. J Am Chem Soc. 2017 Nov 15;139(45):16168-16177. doi: 10.1021/jacs.7b06883. Epub 2017 Nov 1. J Am Chem Soc. 2017. PMID: 29043794

9

Botulinum Endopeptidase: SAXS Experiments and MD Simulations Reveal Extended Solution Structures That Account for Its Biochemical Properties.

Kumar R, Maksudov F, Kononova O, Marx KA, Barsegov V, Singh BR. Kumar R, et al. Among authors: marx ka. J Phys Chem B. 2020 Jul 16;124(28):5801-5812. doi: 10.1021/acs.jpcb.0c02817. Epub 2020 Jul 1. J Phys Chem B. 2020. PMID: 32543194

10

Strength, deformability and toughness of uncrosslinked fibrin fibers from theoretical reconstruction of stress-strain curves.

Maksudov F, Daraei A, Sesha A, Marx KA, Guthold M, Barsegov V. Maksudov F, et al. Among authors: marx ka. Acta Biomater. 2021 Dec;136:327-342. doi: 10.1016/j.actbio.2021.09.050. Epub 2021 Oct 2. Acta Biomater. 2021. PMID: 34606991 Free PMC article.

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