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CoRAL: predicting non-coding RNAs from small RNA-sequencing data.
Leung YY, Ryvkin P, Ungar LH, Gregory BD, Wang LS. Leung YY, et al. Among authors: gregory bd. Nucleic Acids Res. 2013 Aug;41(14):e137. doi: 10.1093/nar/gkt426. Epub 2013 May 21. Nucleic Acids Res. 2013. PMID: 23700308 Free PMC article.
Global analysis of RNA secondary structure in two metazoans.
Li F, Zheng Q, Ryvkin P, Dragomir I, Desai Y, Aiyer S, Valladares O, Yang J, Bambina S, Sabin LR, Murray JI, Lamitina T, Raj A, Cherry S, Wang LS, Gregory BD. Li F, et al. Among authors: gregory bd. Cell Rep. 2012 Jan 26;1(1):69-82. doi: 10.1016/j.celrep.2011.10.002. Epub 2012 Jan 26. Cell Rep. 2012. PMID: 22832108 Free article.
HAMR: high-throughput annotation of modified ribonucleotides.
Ryvkin P, Leung YY, Silverman IM, Childress M, Valladares O, Dragomir I, Gregory BD, Wang LS. Ryvkin P, et al. Among authors: gregory bd. RNA. 2013 Dec;19(12):1684-92. doi: 10.1261/rna.036806.112. Epub 2013 Oct 22. RNA. 2013. PMID: 24149843 Free PMC article.
DASHR: database of small human noncoding RNAs.
Leung YY, Kuksa PP, Amlie-Wolf A, Valladares O, Ungar LH, Kannan S, Gregory BD, Wang LS. Leung YY, et al. Among authors: gregory bd. Nucleic Acids Res. 2016 Jan 4;44(D1):D216-22. doi: 10.1093/nar/gkv1188. Epub 2015 Nov 8. Nucleic Acids Res. 2016. PMID: 26553799 Free PMC article.
140 results