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Design, implementation and multisite evaluation of a system suitability protocol for the quantitative assessment of instrument performance in liquid chromatography-multiple reaction monitoring-MS (LC-MRM-MS).
Abbatiello SE, Mani DR, Schilling B, Maclean B, Zimmerman LJ, Feng X, Cusack MP, Sedransk N, Hall SC, Addona T, Allen S, Dodder NG, Ghosh M, Held JM, Hedrick V, Inerowicz HD, Jackson A, Keshishian H, Kim JW, Lyssand JS, Riley CP, Rudnick P, Sadowski P, Shaddox K, Smith D, Tomazela D, Wahlander A, Waldemarson S, Whitwell CA, You J, Zhang S, Kinsinger CR, Mesri M, Rodriguez H, Borchers CH, Buck C, Fisher SJ, Gibson BW, Liebler D, Maccoss M, Neubert TA, Paulovich A, Regnier F, Skates SJ, Tempst P, Wang M, Carr SA. Abbatiello SE, et al. Among authors: maclean b. Mol Cell Proteomics. 2013 Sep;12(9):2623-39. doi: 10.1074/mcp.M112.027078. Epub 2013 May 20. Mol Cell Proteomics. 2013. PMID: 23689285 Free PMC article.
Targeted proteomics data interpretation with DeepMRM.
Park J, Wilkins C, Avtonomov D, Hong J, Back S, Kim H, Shulman N, MacLean BX, Lee SW, Kim S. Park J, et al. Cell Rep Methods. 2023 Jul 11;3(7):100521. doi: 10.1016/j.crmeth.2023.100521. eCollection 2023 Jul 24. Cell Rep Methods. 2023. PMID: 37533638 Free PMC article.
Koina: Democratizing machine learning for proteomics research.
Lautenbacher L, Yang KL, Kockmann T, Panse C, Chambers M, Kahl E, Yu F, Gabriel W, Bold D, Schmidt T, Li K, MacLean B, Nesvizhskii AI, Wilhelm M. Lautenbacher L, et al. Among authors: maclean b. bioRxiv [Preprint]. 2024 Jun 3:2024.06.01.596953. doi: 10.1101/2024.06.01.596953. bioRxiv. 2024. PMID: 38895358 Free PMC article. Preprint.
143 results