Embree M - Search Results

1

Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.

Qiu Y, Nagarajan H, Embree M, Shieu W, Abate E, Juárez K, Cho BK, Elkins JG, Nevin KP, Barrett CL, Lovley DR, Palsson BO, Zengler K. Qiu Y, et al. Among authors: embree m. Nat Commun. 2013;4:1755. doi: 10.1038/ncomms2743. Nat Commun. 2013. PMID: 23612296 Free article.

2

The PurR regulon in Escherichia coli K-12 MG1655.

Cho BK, Federowicz SA, Embree M, Park YS, Kim D, Palsson BØ. Cho BK, et al. Among authors: embree m. Nucleic Acids Res. 2011 Aug;39(15):6456-64. doi: 10.1093/nar/gkr307. Epub 2011 May 13. Nucleic Acids Res. 2011. PMID: 21572102 Free PMC article.

3

Sulfide-driven microbial electrosynthesis.

Gong Y, Ebrahim A, Feist AM, Embree M, Zhang T, Lovley D, Zengler K. Gong Y, et al. Among authors: embree m. Environ Sci Technol. 2013 Jan 2;47(1):568-73. doi: 10.1021/es303837j. Epub 2012 Dec 19. Environ Sci Technol. 2013. PMID: 23252645

4

Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community.

Embree M, Nagarajan H, Movahedi N, Chitsaz H, Zengler K. Embree M, et al. ISME J. 2014 Apr;8(4):757-67. doi: 10.1038/ismej.2013.187. Epub 2013 Oct 24. ISME J. 2014. PMID: 24152715 Free PMC article.

5

Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association.

Nagarajan H, Embree M, Rotaru AE, Shrestha PM, Feist AM, Palsson BØ, Lovley DR, Zengler K. Nagarajan H, et al. Among authors: embree m. Nat Commun. 2013;4:2809. doi: 10.1038/ncomms3809. Nat Commun. 2013. PMID: 24264237 Free article.

6

The iron stimulon and fur regulon of Geobacter sulfurreducens and their role in energy metabolism.

Embree M, Qiu Y, Shieu W, Nagarajan H, O'Neil R, Lovley D, Zengler K. Embree M, et al. Appl Environ Microbiol. 2014 May;80(9):2918-27. doi: 10.1128/AEM.03916-13. Epub 2014 Feb 28. Appl Environ Microbiol. 2014. PMID: 24584254 Free PMC article.

7

Supplementation of saturated long-chain fatty acids maintains intestinal eubiosis and reduces ethanol-induced liver injury in mice.

Chen P, Torralba M, Tan J, Embree M, Zengler K, Stärkel P, van Pijkeren JP, DePew J, Loomba R, Ho SB, Bajaj JS, Mutlu EA, Keshavarzian A, Tsukamoto H, Nelson KE, Fouts DE, Schnabl B. Chen P, et al. Among authors: embree m. Gastroenterology. 2015 Jan;148(1):203-214.e16. doi: 10.1053/j.gastro.2014.09.014. Epub 2014 Sep 16. Gastroenterology. 2015. PMID: 25239591 Free PMC article.

8

Networks of energetic and metabolic interactions define dynamics in microbial communities.

Embree M, Liu JK, Al-Bassam MM, Zengler K. Embree M, et al. Proc Natl Acad Sci U S A. 2015 Dec 15;112(50):15450-5. doi: 10.1073/pnas.1506034112. Epub 2015 Nov 30. Proc Natl Acad Sci U S A. 2015. PMID: 26621749 Free PMC article.

9

Efficient Synergistic Single-Cell Genome Assembly.

Movahedi NS, Embree M, Nagarajan H, Zengler K, Chitsaz H. Movahedi NS, et al. Among authors: embree m. Front Bioeng Biotechnol. 2016 May 23;4:42. doi: 10.3389/fbioe.2016.00042. eCollection 2016. Front Bioeng Biotechnol. 2016. PMID: 27243002 Free PMC article.

10

Acetate reprograms gut microbiota during alcohol consumption.

Martino C, Zaramela LS, Gao B, Embree M, Tarasova J, Parker SJ, Wang Y, Chu H, Chen P, Lee KC, Galzerani DD, Gengatharan JM, Lekbua A, Neal M, Knight R, Tsukamoto H, Metallo CM, Schnabl B, Zengler K. Martino C, et al. Among authors: embree m. Nat Commun. 2022 Aug 8;13(1):4630. doi: 10.1038/s41467-022-31973-2. Nat Commun. 2022. PMID: 35941112 Free PMC article.

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