Arita M - Search Results

1

MRMPROBS: a data assessment and metabolite identification tool for large-scale multiple reaction monitoring based widely targeted metabolomics.

Tsugawa H, Arita M, Kanazawa M, Ogiwara A, Bamba T, Fukusaki E. Tsugawa H, et al. Among authors: arita m. Anal Chem. 2013 May 21;85(10):5191-9. doi: 10.1021/ac400515s. Epub 2013 May 1. Anal Chem. 2013. PMID: 23581547

2

Large-scale prediction of cationic metabolite identity and migration time in capillary electrophoresis mass spectrometry using artificial neural networks.

Sugimoto M, Kikuchi S, Arita M, Soga T, Nishioka T, Tomita M. Sugimoto M, et al. Among authors: arita m. Anal Chem. 2005 Jan 1;77(1):78-84. doi: 10.1021/ac048950g. Anal Chem. 2005. PMID: 15623281

3

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data.

Redestig H, Fukushima A, Stenlund H, Moritz T, Arita M, Saito K, Kusano M. Redestig H, et al. Among authors: arita m. Anal Chem. 2009 Oct 1;81(19):7974-80. doi: 10.1021/ac901143w. Anal Chem. 2009. PMID: 19743813

4

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis.

Redestig H, Kusano M, Fukushima A, Matsuda F, Saito K, Arita M. Redestig H, et al. Among authors: arita m. BMC Bioinformatics. 2010 Apr 29;11:214. doi: 10.1186/1471-2105-11-214. BMC Bioinformatics. 2010. PMID: 20426876 Free PMC article.

5

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach.

Fukushima A, Kusano M, Redestig H, Arita M, Saito K. Fukushima A, et al. Among authors: arita m. BMC Syst Biol. 2011 Jan 1;5:1. doi: 10.1186/1752-0509-5-1. BMC Syst Biol. 2011. PMID: 21194489 Free PMC article.

6

GC/MS based metabolomics: development of a data mining system for metabolite identification by using soft independent modeling of class analogy (SIMCA).

Tsugawa H, Tsujimoto Y, Arita M, Bamba T, Fukusaki E. Tsugawa H, et al. Among authors: arita m. BMC Bioinformatics. 2011 May 4;12:131. doi: 10.1186/1471-2105-12-131. BMC Bioinformatics. 2011. PMID: 21542920 Free PMC article.

7

MRMPROBS suite for metabolomics using large-scale MRM assays.

Tsugawa H, Kanazawa M, Ogiwara A, Arita M. Tsugawa H, et al. Among authors: arita m. Bioinformatics. 2014 Aug 15;30(16):2379-80. doi: 10.1093/bioinformatics/btu203. Epub 2014 Apr 20. Bioinformatics. 2014. PMID: 24753485

8

MRM-DIFF: data processing strategy for differential analysis in large scale MRM-based lipidomics studies.

Tsugawa H, Ohta E, Izumi Y, Ogiwara A, Yukihira D, Bamba T, Fukusaki E, Arita M. Tsugawa H, et al. Among authors: arita m. Front Genet. 2015 Jan 30;5:471. doi: 10.3389/fgene.2014.00471. eCollection 2014. Front Genet. 2015. PMID: 25688256 Free PMC article.

9

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis.

Tsugawa H, Cajka T, Kind T, Ma Y, Higgins B, Ikeda K, Kanazawa M, VanderGheynst J, Fiehn O, Arita M. Tsugawa H, et al. Among authors: arita m. Nat Methods. 2015 Jun;12(6):523-6. doi: 10.1038/nmeth.3393. Epub 2015 May 4. Nat Methods. 2015. PMID: 25938372 Free PMC article.

10

Hydrogen Rearrangement Rules: Computational MS/MS Fragmentation and Structure Elucidation Using MS-FINDER Software.

Tsugawa H, Kind T, Nakabayashi R, Yukihira D, Tanaka W, Cajka T, Saito K, Fiehn O, Arita M. Tsugawa H, et al. Among authors: arita m. Anal Chem. 2016 Aug 16;88(16):7946-58. doi: 10.1021/acs.analchem.6b00770. Epub 2016 Aug 4. Anal Chem. 2016. PMID: 27419259 Free PMC article.

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