Lussier YA - Search Results

1

Interpreting personal transcriptomes: personalized mechanism-scale profiling of RNA-seq data.

Perez-Rathke A, Li H, Lussier YA. Perez-Rathke A, et al. Among authors: lussier ya. Pac Symp Biocomput. 2013:159-70. Pac Symp Biocomput. 2013. PMID: 23424121 Free PMC article.

2

Towards mechanism classifiers: expression-anchored Gene Ontology signature predicts clinical outcome in lung adenocarcinoma patients.

Yang X, Li H, Regan K, Li J, Huang Y, Lussier YA. Yang X, et al. Among authors: lussier ya. AMIA Annu Symp Proc. 2012;2012:1040-9. Epub 2012 Nov 3. AMIA Annu Symp Proc. 2012. PMID: 23304380 Free PMC article.

3

'N-of-1-pathways' unveils personal deregulated mechanisms from a single pair of RNA-Seq samples: towards precision medicine.

Gardeux V, Achour I, Li J, Maienschein-Cline M, Li H, Pesce L, Parinandi G, Bahroos N, Winn R, Foster I, Garcia JG, Lussier YA. Gardeux V, et al. Among authors: lussier ya. J Am Med Inform Assoc. 2014 Nov-Dec;21(6):1015-25. doi: 10.1136/amiajnl-2013-002519. Epub 2014 Jun 12. J Am Med Inform Assoc. 2014. PMID: 25301808 Free PMC article.

4

kMEn: Analyzing noisy and bidirectional transcriptional pathway responses in single subjects.

Li Q, Schissler AG, Gardeux V, Berghout J, Achour I, Kenost C, Li H, Zhang HH, Lussier YA. Li Q, et al. Among authors: lussier ya. J Biomed Inform. 2017 Feb;66:32-41. doi: 10.1016/j.jbi.2016.12.009. Epub 2016 Dec 19. J Biomed Inform. 2017. PMID: 28007582 Free PMC article.

5

N-of-1-pathways MixEnrich: advancing precision medicine via single-subject analysis in discovering dynamic changes of transcriptomes.

Li Q, Schissler AG, Gardeux V, Achour I, Kenost C, Berghout J, Li H, Zhang HH, Lussier YA. Li Q, et al. Among authors: lussier ya. BMC Med Genomics. 2017 May 24;10(Suppl 1):27. doi: 10.1186/s12920-017-0263-4. BMC Med Genomics. 2017. PMID: 28589853 Free PMC article.

6

Convergent downstream candidate mechanisms of independent intergenic polymorphisms between co-classified diseases implicate epistasis among noncoding elements.

Han J, Li J, Achour I, Pesce L, Foster I, Li H, Lussier YA. Han J, et al. Among authors: lussier ya. Pac Symp Biocomput. 2018;23:524-535. Pac Symp Biocomput. 2018. PMID: 29218911 Free PMC article.

7

Precision drug repurposing via convergent eQTL-based molecules and pathway targeting independent disease-associated polymorphisms.

Vitali F, Berghout J, Fan J, Li J, Li Q, Li H, Lussier YA. Vitali F, et al. Among authors: lussier ya. Pac Symp Biocomput. 2019;24:308-319. Pac Symp Biocomput. 2019. PMID: 30864332 Free PMC article.

8

Curation-free biomodules mechanisms in prostate cancer predict recurrent disease.

Chen JL, Hsu A, Yang X, Li J, Lee Y, Parinandi G, Li H, Lussier YA. Chen JL, et al. Among authors: lussier ya. BMC Med Genomics. 2013;6 Suppl 2(Suppl 2):S4. doi: 10.1186/1755-8794-6-S2-S4. Epub 2013 May 7. BMC Med Genomics. 2013. PMID: 23819917 Free PMC article.

9

Complex-disease networks of trait-associated single-nucleotide polymorphisms (SNPs) unveiled by information theory.

Li H, Lee Y, Chen JL, Rebman E, Li J, Lussier YA. Li H, et al. Among authors: lussier ya. J Am Med Inform Assoc. 2012 Mar-Apr;19(2):295-305. doi: 10.1136/amiajnl-2011-000482. Epub 2012 Jan 25. J Am Med Inform Assoc. 2012. PMID: 22278381 Free PMC article.

10

Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases.

Lee Y, Li H, Li J, Rebman E, Achour I, Regan KE, Gamazon ER, Chen JL, Yang XH, Cox NJ, Lussier YA. Lee Y, et al. Among authors: lussier ya. J Am Med Inform Assoc. 2013 Jul-Aug;20(4):619-29. doi: 10.1136/amiajnl-2012-001519. Epub 2013 Jan 25. J Am Med Inform Assoc. 2013. PMID: 23355459 Free PMC article.

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