Ermakova E - Search Results

1

Lactose binding to human galectin-7 (p53-induced gene 1) induces long-range effects through the protein resulting in increased dimer stability and evidence for positive cooperativity.

Ermakova E, Miller MC, Nesmelova IV, López-Merino L, Berbís MA, Nesmelov Y, Tkachev YV, Lagartera L, Daragan VA, André S, Cañada FJ, Jiménez-Barbero J, Solís D, Gabius HJ, Mayo KH. Ermakova E, et al. Glycobiology. 2013 May;23(5):508-23. doi: 10.1093/glycob/cwt005. Epub 2013 Jan 31. Glycobiology. 2013. PMID: 23376190 Free PMC article.

2

The Ability of Some Polysaccharides to Disaggregate Lysozyme Amyloid Fibrils and Renature the Protein.

Makshakova O, Bogdanova L, Faizullin D, Khaibrakhmanova D, Ziganshina S, Ermakova E, Zuev Y, Sedov I. Makshakova O, et al. Among authors: ermakova e. Pharmaceutics. 2023 Feb 13;15(2):624. doi: 10.3390/pharmaceutics15020624. Pharmaceutics. 2023. PMID: 36839946 Free PMC article.

3

Lactose binding to galectin-1 modulates structural dynamics, increases conformational entropy, and occurs with apparent negative cooperativity.

Nesmelova IV, Ermakova E, Daragan VA, Pang M, Menéndez M, Lagartera L, Solís D, Baum LG, Mayo KH. Nesmelova IV, et al. Among authors: ermakova e. J Mol Biol. 2010 Apr 16;397(5):1209-30. doi: 10.1016/j.jmb.2010.02.033. Epub 2010 Feb 23. J Mol Biol. 2010. PMID: 20184898

4

Dynamics and thermodynamic properties of CXCL7 chemokine.

Herring CA, Singer CM, Ermakova EA, Khairutdinov BI, Zuev YF, Jacobs DJ, Nesmelova IV. Herring CA, et al. Proteins. 2015 Nov;83(11):1987-2007. doi: 10.1002/prot.24913. Epub 2015 Sep 2. Proteins. 2015. PMID: 26297927

5

Structure of Scots pine defensin 1 by spectroscopic methods and computational modeling.

Ermakova EA, Faizullin DA, Idiyatullin BZ, Khairutdinov BI, Mukhamedova LN, Tarasova NB, Toporkova YY, Osipova EV, Kovaleva V, Gogolev YV, Zuev YF, Nesmelova IV. Ermakova EA, et al. Int J Biol Macromol. 2016 Mar;84:142-52. doi: 10.1016/j.ijbiomac.2015.12.011. Epub 2015 Dec 11. Int J Biol Macromol. 2016. PMID: 26687241

6

NMR structure, conformational dynamics, and biological activity of PsDef1 defensin from Pinus sylvestris.

Khairutdinov BI, Ermakova EA, Yusypovych YM, Bessolicina EK, Tarasova NB, Toporkova YY, Kovaleva V, Zuev YF, Nesmelova IV. Khairutdinov BI, et al. Biochim Biophys Acta Proteins Proteom. 2017 Aug;1865(8):1085-1094. doi: 10.1016/j.bbapap.2017.05.012. Epub 2017 May 17. Biochim Biophys Acta Proteins Proteom. 2017. PMID: 28528214 Free article.

7

Effect of ligand binding on the dynamics of trypsin. Comparison of different approaches.

Ermakova E, Kurbanov R. Ermakova E, et al. J Mol Graph Model. 2014 Apr;49:99-109. doi: 10.1016/j.jmgm.2014.02.001. Epub 2014 Feb 17. J Mol Graph Model. 2014. PMID: 24642055

8

Structural basis for regulation of stability and activity in glyceraldehyde-3-phosphate dehydrogenases. Differential scanning calorimetry and molecular dynamics.

Makshakova ON, Semenyuk PI, Kuravsky ML, Ermakova EA, Zuev YF, Muronetz VI. Makshakova ON, et al. J Struct Biol. 2015 May;190(2):224-35. doi: 10.1016/j.jsb.2015.04.004. Epub 2015 Apr 11. J Struct Biol. 2015. PMID: 25869789

9

Molecular insight into conformational transformation of human glucokinase: conventional and targeted molecular dynamics.

Ermakova E, Kurbanov R. Ermakova E, et al. J Biomol Struct Dyn. 2020 Jul;38(10):3035-3045. doi: 10.1080/07391102.2019.1652689. Epub 2019 Aug 13. J Biomol Struct Dyn. 2020. PMID: 31379266

10

Interaction of Scots Pine Defensin with Model Membrane by Coarse-Grained Molecular Dynamics.

Ermakova E, Zuev Y. Ermakova E, et al. J Membr Biol. 2017 Apr;250(2):205-216. doi: 10.1007/s00232-017-9950-5. Epub 2017 Feb 18. J Membr Biol. 2017. PMID: 28214974 Free article.

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