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High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies.
Goudey B, Abedini M, Hopper JL, Inouye M, Makalic E, Schmidt DF, Wagner J, Zhou Z, Zobel J, Reumann M. Goudey B, et al. Health Inf Sci Syst. 2015 Feb 24;3(Suppl 1 HISA Big Data in Biomedicine and Healthcare 2013 Con):S3. doi: 10.1186/2047-2501-3-S1-S3. eCollection 2015. Health Inf Sci Syst. 2015. PMID: 25870758 Free PMC article.
Use of a Novel Nonparametric Version of DEPTH to Identify Genomic Regions Associated with Prostate Cancer Risk.
MacInnis RJ, Schmidt DF, Makalic E, Severi G, FitzGerald LM, Reumann M, Kapuscinski MK, Kowalczyk A, Zhou Z, Goudey B, Qian G, Bui QM, Park DJ, Freeman A, Southey MC, Al Olama AA, Kote-Jarai Z, Eeles RA, Hopper JL, Giles GG; UK Genetic Prostate Cancer Study Collaborators. MacInnis RJ, et al. Cancer Epidemiol Biomarkers Prev. 2016 Dec;25(12):1619-1624. doi: 10.1158/1055-9965.EPI-16-0301. Epub 2016 Aug 18. Cancer Epidemiol Biomarkers Prev. 2016. PMID: 27539266 Free PMC article.
Exploring effective approaches for haplotype block phasing.
Al Bkhetan Z, Zobel J, Kowalczyk A, Verspoor K, Goudey B. Al Bkhetan Z, et al. BMC Bioinformatics. 2019 Oct 30;20(1):540. doi: 10.1186/s12859-019-3095-8. BMC Bioinformatics. 2019. PMID: 31666002 Free PMC article.
25 results