Boitano M - Search Results

1

Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation.

Clark TA, Lu X, Luong K, Dai Q, Boitano M, Turner SW, He C, Korlach J. Clark TA, et al. Among authors: boitano m. BMC Biol. 2013 Jan 22;11:4. doi: 10.1186/1741-7007-11-4. BMC Biol. 2013. PMID: 23339471 Free PMC article.

2

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing.

Clark TA, Murray IA, Morgan RD, Kislyuk AO, Spittle KE, Boitano M, Fomenkov A, Roberts RJ, Korlach J. Clark TA, et al. Among authors: boitano m. Nucleic Acids Res. 2012 Feb;40(4):e29. doi: 10.1093/nar/gkr1146. Epub 2011 Dec 7. Nucleic Acids Res. 2012. PMID: 22156058 Free PMC article.

3

The methylomes of six bacteria.

Murray IA, Clark TA, Morgan RD, Boitano M, Anton BP, Luong K, Fomenkov A, Turner SW, Korlach J, Roberts RJ. Murray IA, et al. Among authors: boitano m. Nucleic Acids Res. 2012 Dec;40(22):11450-62. doi: 10.1093/nar/gks891. Epub 2012 Oct 2. Nucleic Acids Res. 2012. PMID: 23034806 Free PMC article.

4

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences.

Cao B, Chen C, DeMott MS, Cheng Q, Clark TA, Xiong X, Zheng X, Butty V, Levine SS, Yuan G, Boitano M, Luong K, Song Y, Zhou X, Deng Z, Turner SW, Korlach J, You D, Wang L, Chen S, Dedon PC. Cao B, et al. Among authors: boitano m. Nat Commun. 2014 Jun 5;5:3951. doi: 10.1038/ncomms4951. Nat Commun. 2014. PMID: 24899568 Free PMC article.

5

Whole-genome assembly of Klebsiella pneumoniae coproducing NDM-1 and OXA-232 carbapenemases using single-molecule, real-time sequencing.

Doi Y, Hazen TH, Boitano M, Tsai YC, Clark TA, Korlach J, Rasko DA. Doi Y, et al. Among authors: boitano m. Antimicrob Agents Chemother. 2014 Oct;58(10):5947-53. doi: 10.1128/AAC.03180-14. Epub 2014 Jul 28. Antimicrob Agents Chemother. 2014. PMID: 25070096 Free PMC article.

6

ModM DNA methyltransferase methylome analysis reveals a potential role for Moraxella catarrhalis phasevarions in otitis media.

Blakeway LV, Power PM, Jen FE, Worboys SR, Boitano M, Clark TA, Korlach J, Bakaletz LO, Jennings MP, Peak IR, Seib KL. Blakeway LV, et al. Among authors: boitano m. FASEB J. 2014 Dec;28(12):5197-207. doi: 10.1096/fj.14-256578. Epub 2014 Sep 2. FASEB J. 2014. PMID: 25183669

7

Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae.

Conlan S, Thomas PJ, Deming C, Park M, Lau AF, Dekker JP, Snitkin ES, Clark TA, Luong K, Song Y, Tsai YC, Boitano M, Dayal J, Brooks SY, Schmidt B, Young AC, Thomas JW, Bouffard GG, Blakesley RW; NISC Comparative Sequencing Program; Mullikin JC, Korlach J, Henderson DK, Frank KM, Palmore TN, Segre JA. Conlan S, et al. Among authors: boitano m. Sci Transl Med. 2014 Sep 17;6(254):254ra126. doi: 10.1126/scitranslmed.3009845. Sci Transl Med. 2014. PMID: 25232178 Free PMC article.

8

Defining the sequence requirements for the positioning of base J in DNA using SMRT sequencing.

Genest PA, Baugh L, Taipale A, Zhao W, Jan S, van Luenen HG, Korlach J, Clark T, Luong K, Boitano M, Turner S, Myler PJ, Borst P. Genest PA, et al. Among authors: boitano m. Nucleic Acids Res. 2015 Feb 27;43(4):2102-15. doi: 10.1093/nar/gkv095. Epub 2015 Feb 6. Nucleic Acids Res. 2015. PMID: 25662217 Free PMC article.

9

Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars.

Pirone-Davies C, Hoffmann M, Roberts RJ, Muruvanda T, Timme RE, Strain E, Luo Y, Payne J, Luong K, Song Y, Tsai YC, Boitano M, Clark TA, Korlach J, Evans PS, Allard MW. Pirone-Davies C, et al. Among authors: boitano m. PLoS One. 2015 Apr 10;10(4):e0123639. doi: 10.1371/journal.pone.0123639. eCollection 2015. PLoS One. 2015. PMID: 25860355 Free PMC article.

10

Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle.

Kozdon JB, Melfi MD, Luong K, Clark TA, Boitano M, Wang S, Zhou B, Gonzalez D, Collier J, Turner SW, Korlach J, Shapiro L, McAdams HH. Kozdon JB, et al. Among authors: boitano m. Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):E4658-67. doi: 10.1073/pnas.1319315110. Epub 2013 Nov 11. Proc Natl Acad Sci U S A. 2013. PMID: 24218615 Free PMC article.

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