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428 results

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Page 1
One bacterial cell, one complete genome.
Woyke T, Tighe D, Mavromatis K, Clum A, Copeland A, Schackwitz W, Lapidus A, Wu D, McCutcheon JP, McDonald BR, Moran NA, Bristow J, Cheng JF. Woyke T, et al. Among authors: lapidus a. PLoS One. 2010 Apr 23;5(4):e10314. doi: 10.1371/journal.pone.0010314. PLoS One. 2010. PMID: 20428247 Free PMC article.
Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX.
Lykidis A, Mavromatis K, Ivanova N, Anderson I, Land M, DiBartolo G, Martinez M, Lapidus A, Lucas S, Copeland A, Richardson P, Wilson DB, Kyrpides N. Lykidis A, et al. Among authors: lapidus a. J Bacteriol. 2007 Mar;189(6):2477-86. doi: 10.1128/JB.01899-06. Epub 2007 Jan 5. J Bacteriol. 2007. PMID: 17209016 Free PMC article.
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
Mavromatis K, Ivanova N, Barry K, Shapiro H, Goltsman E, McHardy AC, Rigoutsos I, Salamov A, Korzeniewski F, Land M, Lapidus A, Grigoriev I, Richardson P, Hugenholtz P, Kyrpides NC. Mavromatis K, et al. Among authors: lapidus a. Nat Methods. 2007 Jun;4(6):495-500. doi: 10.1038/nmeth1043. Epub 2007 Apr 29. Nat Methods. 2007. PMID: 17468765 Free article.
A bioinformatician's guide to metagenomics.
Kunin V, Copeland A, Lapidus A, Mavromatis K, Hugenholtz P. Kunin V, et al. Among authors: lapidus a. Microbiol Mol Biol Rev. 2008 Dec;72(4):557-78, Table of Contents. doi: 10.1128/MMBR.00009-08. Microbiol Mol Biol Rev. 2008. PMID: 19052320 Free PMC article. Review.
Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii.
Mavromatis K, Ivanova N, Anderson I, Lykidis A, Hooper SD, Sun H, Kunin V, Lapidus A, Hugenholtz P, Patel B, Kyrpides NC. Mavromatis K, et al. Among authors: lapidus a. PLoS One. 2009;4(1):e4192. doi: 10.1371/journal.pone.0004192. Epub 2009 Jan 15. PLoS One. 2009. PMID: 19145256 Free PMC article.
Genomic characterization of methanomicrobiales reveals three classes of methanogens.
Anderson I, Ulrich LE, Lupa B, Susanti D, Porat I, Hooper SD, Lykidis A, Sieprawska-Lupa M, Dharmarajan L, Goltsman E, Lapidus A, Saunders E, Han C, Land M, Lucas S, Mukhopadhyay B, Whitman WB, Woese C, Bristow J, Kyrpides N. Anderson I, et al. Among authors: lapidus a. PLoS One. 2009 Jun 4;4(6):e5797. doi: 10.1371/journal.pone.0005797. PLoS One. 2009. PMID: 19495416 Free PMC article.
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea.
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, Kunin V, Goodwin L, Wu M, Tindall BJ, Hooper SD, Pati A, Lykidis A, Spring S, Anderson IJ, D'haeseleer P, Zemla A, Singer M, Lapidus A, Nolan M, Copeland A, Han C, Chen F, Cheng JF, Lucas S, Kerfeld C, Lang E, Gronow S, Chain P, Bruce D, Rubin EM, Kyrpides NC, Klenk HP, Eisen JA. Wu D, et al. Among authors: lapidus a. Nature. 2009 Dec 24;462(7276):1056-60. doi: 10.1038/nature08656. Nature. 2009. PMID: 20033048 Free PMC article.
Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3.
Lucas S, Han J, Lapidus A, Cheng JF, Goodwin LA, Pitluck S, Peters L, Mikhailova N, Teshima H, Detter JC, Han C, Tapia R, Land M, Hauser L, Kyrpides NC, Ivanova N, Pagani I, Vannier P, Oger P, Bartlett DH, Noll KM, Woyke T, Jebbar M. Lucas S, et al. Among authors: lapidus a. J Bacteriol. 2012 Nov;194(21):5974-5. doi: 10.1128/JB.01430-12. J Bacteriol. 2012. PMID: 23045491 Free PMC article.
428 results