Swerdlow HP - Search Results

1

Efficient depletion of host DNA contamination in malaria clinical sequencing.

Oyola SO, Gu Y, Manske M, Otto TD, O'Brien J, Alcock D, Macinnis B, Berriman M, Newbold CI, Kwiatkowski DP, Swerdlow HP, Quail MA. Oyola SO, et al. Among authors: swerdlow hp. J Clin Microbiol. 2013 Mar;51(3):745-51. doi: 10.1128/JCM.02507-12. Epub 2012 Dec 5. J Clin Microbiol. 2013. PMID: 23224084 Free PMC article.

2

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

Oyola SO, Otto TD, Gu Y, Maslen G, Manske M, Campino S, Turner DJ, Macinnis B, Kwiatkowski DP, Swerdlow HP, Quail MA. Oyola SO, et al. Among authors: swerdlow hp. BMC Genomics. 2012 Jan 3;13:1. doi: 10.1186/1471-2164-13-1. BMC Genomics. 2012. PMID: 22214261 Free PMC article.

3

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.

Quail MA, Smith M, Coupland P, Otto TD, Harris SR, Connor TR, Bertoni A, Swerdlow HP, Gu Y. Quail MA, et al. Among authors: swerdlow hp. BMC Genomics. 2012 Jul 24;13:341. doi: 10.1186/1471-2164-13-341. BMC Genomics. 2012. PMID: 22827831 Free PMC article.

4

Improved protocols for the illumina genome analyzer sequencing system.

Quail MA, Swerdlow H, Turner DJ. Quail MA, et al. Curr Protoc Hum Genet. 2009 Jul;Chapter 18:Unit 18.2. doi: 10.1002/0471142905.hg1802s62. Curr Protoc Hum Genet. 2009. PMID: 19582764 Free PMC article.

5

Evaluation and optimisation of preparative semi-automated electrophoresis systems for Illumina library preparation.

Quail MA, Gu Y, Swerdlow H, Mayho M. Quail MA, et al. Electrophoresis. 2012 Dec;33(23):3521-8. doi: 10.1002/elps.201200128. Epub 2012 Nov 12. Electrophoresis. 2012. PMID: 23147856

6

An In-Solution Hybridisation Method for the Isolation of Pathogen DNA from Human DNA-rich Clinical Samples for Analysis by NGS.

Smith M, Campino S, Gu Y, Clark TG, Otto TD, Maslen G, Manske M, Imwong M, Dondorp AM, Kwiatkowski DP, Quail MA, Swerdlow H. Smith M, et al. Open Genomics J. 2012;5:10.2174/1875693X01205010018. doi: 10.2174/1875693X01205010018. Open Genomics J. 2012. PMID: 24273626 Free PMC article.

7

SASI-Seq: sample assurance Spike-Ins, and highly differentiating 384 barcoding for Illumina sequencing.

Quail MA, Smith M, Jackson D, Leonard S, Skelly T, Swerdlow HP, Gu Y, Ellis P. Quail MA, et al. Among authors: swerdlow hp. BMC Genomics. 2014 Feb 7;15(1):110. doi: 10.1186/1471-2164-15-110. BMC Genomics. 2014. PMID: 24507442 Free PMC article.

8

Improved Protocols for Illumina Sequencing.

Bronner IF, Quail MA, Turner DJ, Swerdlow H. Bronner IF, et al. Curr Protoc Hum Genet. 2014 Jan 21;80:18.2.1-42. doi: 10.1002/0471142905.hg1802s80. Curr Protoc Hum Genet. 2014. PMID: 26270174

9

A large genome center's improvements to the Illumina sequencing system.

Quail MA, Kozarewa I, Smith F, Scally A, Stephens PJ, Durbin R, Swerdlow H, Turner DJ. Quail MA, et al. Nat Methods. 2008 Dec;5(12):1005-10. doi: 10.1038/nmeth.1270. Nat Methods. 2008. PMID: 19034268 Free PMC article.

10

Optimal enzymes for amplifying sequencing libraries.

Quail MA, Otto TD, Gu Y, Harris SR, Skelly TF, McQuillan JA, Swerdlow HP, Oyola SO. Quail MA, et al. Among authors: swerdlow hp. Nat Methods. 2011 Dec 28;9(1):10-1. doi: 10.1038/nmeth.1814. Nat Methods. 2011. PMID: 22205512 No abstract available.

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