Yu D - Search Results

1

Enhancing membrane protein subcellular localization prediction by parallel fusion of multi-view features.

Yu D, Wu X, Shen H, Yang J, Tang Z, Qi Y, Yang J. Yu D, et al. IEEE Trans Nanobioscience. 2012 Dec;11(4):375-85. doi: 10.1109/TNB.2012.2208473. Epub 2012 Aug 3. IEEE Trans Nanobioscience. 2012. PMID: 22875262

2

SOMPNN: an efficient non-parametric model for predicting transmembrane helices.

Yu DJ, Shen HB, Yang JY. Yu DJ, et al. Amino Acids. 2012 Jun;42(6):2195-205. doi: 10.1007/s00726-011-0959-2. Epub 2011 Jun 22. Amino Acids. 2012. PMID: 21695537

3

SOMRuler: a novel interpretable transmembrane helices predictor.

Yu D, Shen H, Yang J. Yu D, et al. IEEE Trans Nanobioscience. 2011 Jun;10(2):121-9. doi: 10.1109/TNB.2011.2160730. Epub 2011 Jul 7. IEEE Trans Nanobioscience. 2011. PMID: 21742571

4

Predicting protein-ATP binding sites from primary sequence through fusing bi-profile sampling of multi-view features.

Zhang YN, Yu DJ, Li SS, Fan YX, Huang Y, Shen HB. Zhang YN, et al. BMC Bioinformatics. 2012 May 31;13:118. doi: 10.1186/1471-2105-13-118. BMC Bioinformatics. 2012. PMID: 22651691 Free PMC article.

5

TargetATPsite: a template-free method for ATP-binding sites prediction with residue evolution image sparse representation and classifier ensemble.

Yu DJ, Hu J, Huang Y, Shen HB, Qi Y, Tang ZM, Yang JY. Yu DJ, et al. J Comput Chem. 2013 Apr 30;34(11):974-85. doi: 10.1002/jcc.23219. Epub 2013 Jan 3. J Comput Chem. 2013. PMID: 23288787 Free article.

6

Learning protein multi-view features in complex space.

Yu DJ, Hu J, Wu XW, Shen HB, Chen J, Tang ZM, Yang J, Yang JY. Yu DJ, et al. Amino Acids. 2013 May;44(5):1365-79. doi: 10.1007/s00726-013-1472-6. Epub 2013 Feb 28. Amino Acids. 2013. PMID: 23456487

7

Designing template-free predictor for targeting protein-ligand binding sites with classifier ensemble and spatial clustering.

Yu DJ, Hu J, Yang J, Shen HB, Tang J, Yang JY. Yu DJ, et al. IEEE/ACM Trans Comput Biol Bioinform. 2013 Jul-Aug;10(4):994-1008. doi: 10.1109/TCBB.2013.104. IEEE/ACM Trans Comput Biol Bioinform. 2013. PMID: 24334392

8

δ-Cut decision-theoretic rough set approach: model and attribute reductions.

Ju H, Dou H, Qi Y, Yu H, Yu D, Yang J. Ju H, et al. Among authors: yu d, yu h. ScientificWorldJournal. 2014;2014:382439. doi: 10.1155/2014/382439. Epub 2014 Jul 22. ScientificWorldJournal. 2014. PMID: 25147847 Free PMC article.

9

Enhancing protein-vitamin binding residues prediction by multiple heterogeneous subspace SVMs ensemble.

Yu DJ, Hu J, Yan H, Yang XB, Yang JY, Shen HB. Yu DJ, et al. BMC Bioinformatics. 2014 Sep 5;15(1):297. doi: 10.1186/1471-2105-15-297. BMC Bioinformatics. 2014. PMID: 25189131 Free PMC article.

10

A new supervised over-sampling algorithm with application to protein-nucleotide binding residue prediction.

Hu J, He X, Yu DJ, Yang XB, Yang JY, Shen HB. Hu J, et al. PLoS One. 2014 Sep 17;9(9):e107676. doi: 10.1371/journal.pone.0107676. eCollection 2014. PLoS One. 2014. PMID: 25229688 Free PMC article.

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