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The Arabidopsis Information Resource (TAIR): gene structure and function annotation.
Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E. Swarbreck D, et al. Among authors: li d. Nucleic Acids Res. 2008 Jan;36(Database issue):D1009-14. doi: 10.1093/nar/gkm965. Epub 2007 Nov 5. Nucleic Acids Res. 2008. PMID: 17986450 Free PMC article.
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools.
Lamesch P, Berardini TZ, Li D, Swarbreck D, Wilks C, Sasidharan R, Muller R, Dreher K, Alexander DL, Garcia-Hernandez M, Karthikeyan AS, Lee CH, Nelson WD, Ploetz L, Singh S, Wensel A, Huala E. Lamesch P, et al. Among authors: li d. Nucleic Acids Res. 2012 Jan;40(Database issue):D1202-10. doi: 10.1093/nar/gkr1090. Epub 2011 Dec 2. Nucleic Acids Res. 2012. PMID: 22140109 Free PMC article.
Arabidopsis database and stock resources.
Li D, Dreher K, Knee E, Brkljacic J, Grotewold E, Berardini TZ, Lamesch P, Garcia-Hernandez M, Reiser L, Huala E. Li D, et al. Methods Mol Biol. 2014;1062:65-96. doi: 10.1007/978-1-62703-580-4_4. Methods Mol Biol. 2014. PMID: 24057361
Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO).
Ramsey J, McIntosh B, Renfro D, Aleksander SA, LaBonte S, Ross C, Zweifel AE, Liles N, Farrar S, Gill JJ, Erill I, Ades S, Berardini TZ, Bennett JA, Brady S, Britton R, Carbon S, Caruso SM, Clements D, Dalia R, Defelice M, Doyle EL, Friedberg I, Gurney SMR, Hughes L, Johnson A, Kowalski JM, Li D, Lovering RC, Mans TL, McCarthy F, Moore SD, Murphy R, Paustian TD, Perdue S, Peterson CN, Prüß BM, Saha MS, Sheehy RR, Tansey JT, Temple L, Thorman AW, Trevino S, Vollmer AC, Walbot V, Willey J, Siegele DA, Hu JC. Ramsey J, et al. Among authors: li d. PLoS Comput Biol. 2021 Oct 28;17(10):e1009463. doi: 10.1371/journal.pcbi.1009463. eCollection 2021 Oct. PLoS Comput Biol. 2021. PMID: 34710081 Free PMC article.
The Gene Ontology: enhancements for 2011.
Gene Ontology Consortium. Gene Ontology Consortium. Nucleic Acids Res. 2012 Jan;40(Database issue):D559-64. doi: 10.1093/nar/gkr1028. Epub 2011 Nov 18. Nucleic Acids Res. 2012. PMID: 22102568 Free PMC article.
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