Fernández-Recio J - Search Results

1

Allosteric conversation in the androgen receptor ligand-binding domain surfaces.

Grosdidier S, Carbó LR, Buzón V, Brooke G, Nguyen P, Baxter JD, Bevan C, Webb P, Estébanez-Perpiñá E, Fernández-Recio J. Grosdidier S, et al. Mol Endocrinol. 2012 Jul;26(7):1078-90. doi: 10.1210/me.2011-1281. Epub 2012 May 31. Mol Endocrinol. 2012. PMID: 22653923 Free PMC article.

2

Prediction and scoring of docking poses with pyDock.

Grosdidier S, Pons C, Solernou A, Fernández-Recio J. Grosdidier S, et al. Proteins. 2007 Dec 1;69(4):852-8. doi: 10.1002/prot.21796. Proteins. 2007. PMID: 17876821

3

Identification of hot-spot residues in protein-protein interactions by computational docking.

Grosdidier S, Fernández-Recio J. Grosdidier S, et al. BMC Bioinformatics. 2008 Oct 21;9:447. doi: 10.1186/1471-2105-9-447. BMC Bioinformatics. 2008. PMID: 18939967 Free PMC article.

4

Present and future challenges and limitations in protein-protein docking.

Pons C, Grosdidier S, Solernou A, Pérez-Cano L, Fernández-Recio J. Pons C, et al. Proteins. 2010 Jan;78(1):95-108. doi: 10.1002/prot.22564. Proteins. 2010. PMID: 19731373

5

Optimization of pyDock for the new CAPRI challenges: Docking of homology-based models, domain-domain assembly and protein-RNA binding.

Pons C, Solernou A, Perez-Cano L, Grosdidier S, Fernandez-Recio J. Pons C, et al. Proteins. 2010 Nov 15;78(15):3182-8. doi: 10.1002/prot.22773. Proteins. 2010. PMID: 20602351

6

Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data.

Pons C, D'Abramo M, Svergun DI, Orozco M, Bernadó P, Fernández-Recio J. Pons C, et al. J Mol Biol. 2010 Oct 22;403(2):217-30. doi: 10.1016/j.jmb.2010.08.029. Epub 2010 Sep 8. J Mol Biol. 2010. PMID: 20804770

7

Computer applications for prediction of protein-protein interactions and rational drug design.

Grosdidier S, Totrov M, Fernández-Recio J. Grosdidier S, et al. Adv Appl Bioinform Chem. 2009;2:101-23. Epub 2009 Nov 10. Adv Appl Bioinform Chem. 2009. PMID: 21918619 Free PMC article.

8

Protein-protein docking and hot-spot prediction for drug discovery.

Grosdidier S, Fernández-Recio J. Grosdidier S, et al. Curr Pharm Des. 2012;18(30):4607-18. doi: 10.2174/138161212802651599. Curr Pharm Des. 2012. PMID: 22650255 Review.

9

Docking and scoring: applications to drug discovery in the interactomics era.

Grosdidier S, Fernández-Recio J. Grosdidier S, et al. Expert Opin Drug Discov. 2009 Jun;4(6):673-86. doi: 10.1517/17460440903002067. Expert Opin Drug Discov. 2009. PMID: 23489159

10

Expanding the frontiers of protein-protein modeling: from docking and scoring to binding affinity predictions and other challenges.

Pallara C, Jiménez-García B, Pérez-Cano L, Romero-Durana M, Solernou A, Grosdidier S, Pons C, Moal IH, Fernandez-Recio J. Pallara C, et al. Proteins. 2013 Dec;81(12):2192-200. doi: 10.1002/prot.24387. Epub 2013 Oct 17. Proteins. 2013. PMID: 23934865

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