Ruess J - Search Results

1

Moment-based inference predicts bimodality in transient gene expression.

Zechner C, Ruess J, Krenn P, Pelet S, Peter M, Lygeros J, Koeppl H. Zechner C, et al. Among authors: ruess j. Proc Natl Acad Sci U S A. 2012 May 22;109(21):8340-5. doi: 10.1073/pnas.1200161109. Epub 2012 May 7. Proc Natl Acad Sci U S A. 2012. PMID: 22566653 Free PMC article.

2

Moment estimation for chemically reacting systems by extended Kalman filtering.

Ruess J, Milias-Argeitis A, Summers S, Lygeros J. Ruess J, et al. J Chem Phys. 2011 Oct 28;135(16):165102. doi: 10.1063/1.3654135. J Chem Phys. 2011. PMID: 22047267

3

Designing experiments to understand the variability in biochemical reaction networks.

Ruess J, Milias-Argeitis A, Lygeros J. Ruess J, et al. J R Soc Interface. 2013 Aug 28;10(88):20130588. doi: 10.1098/rsif.2013.0588. Print 2013 Nov 6. J R Soc Interface. 2013. PMID: 23985733 Free PMC article.

4

Iterative experiment design guides the characterization of a light-inducible gene expression circuit.

Ruess J, Parise F, Milias-Argeitis A, Khammash M, Lygeros J. Ruess J, et al. Proc Natl Acad Sci U S A. 2015 Jun 30;112(26):8148-53. doi: 10.1073/pnas.1423947112. Epub 2015 Jun 17. Proc Natl Acad Sci U S A. 2015. PMID: 26085136 Free PMC article.

5

Sensitivity estimation for stochastic models of biochemical reaction networks in the presence of extrinsic variability.

Ruess J, Koeppl H, Zechner C. Ruess J, et al. J Chem Phys. 2017 Mar 28;146(12):124122. doi: 10.1063/1.4978940. J Chem Phys. 2017. PMID: 28388123

6

Using single-cell models to predict the functionality of synthetic circuits at the population scale.

Aditya C, Bertaux F, Batt G, Ruess J. Aditya C, et al. Among authors: ruess j. Proc Natl Acad Sci U S A. 2022 Mar 15;119(11):e2114438119. doi: 10.1073/pnas.2114438119. Epub 2022 Mar 10. Proc Natl Acad Sci U S A. 2022. PMID: 35271387 Free PMC article.

7

Adaptive moment closure for parameter inference of biochemical reaction networks.

Schilling C, Bogomolov S, Henzinger TA, Podelski A, Ruess J. Schilling C, et al. Among authors: ruess j. Biosystems. 2016 Nov;149:15-25. doi: 10.1016/j.biosystems.2016.07.005. Epub 2016 Jul 25. Biosystems. 2016. PMID: 27461396

8

Revisiting moment-closure methods with heterogeneous multiscale population models.

Lunz D, Bonnans JF, Ruess J. Lunz D, et al. Among authors: ruess j. Math Biosci. 2022 Aug;350:108866. doi: 10.1016/j.mbs.2022.108866. Epub 2022 Jun 23. Math Biosci. 2022. PMID: 35753520

9

Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space.

Ruess J. Ruess J. J Chem Phys. 2015 Dec 28;143(24):244103. doi: 10.1063/1.4937937. J Chem Phys. 2015. PMID: 26723647

10

Shaping bacterial population behavior through computer-interfaced control of individual cells.

Chait R, Ruess J, Bergmiller T, Tkačik G, Guet CC. Chait R, et al. Among authors: ruess j. Nat Commun. 2017 Nov 16;8(1):1535. doi: 10.1038/s41467-017-01683-1. Nat Commun. 2017. PMID: 29142298 Free PMC article.

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